RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 EFCAB1Q9HAE3 211 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF275Q9NSD4 429 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 CMTM6Q9NX76 183 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 ATPIF1Q9UII2 106 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 TMEM5Q9Y2B1 443 aa12.38□□□□□ -0.43
SMARCE1-213ENST00000578044 A0A1W2PRQ8 180 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 FFAR1O14842 300 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 NCR1O76036 304 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 MSMBP08118 114 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 CD55P08174 381 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 IFI30P13284 250 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF32P17041 273 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 GATA3P23771 443 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 MMP15P51511 669 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 LMO4P61968 165 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 PSG4Q00888 419 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 CD47Q08722 323 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 DGCR6Q14129 220 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 TRIP10Q15642 601 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ARL9Q6T311 187 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 MBOAT2Q6ZWT7 520 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ZER1Q7Z7L7 766 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 OAFQ86UD1 273 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 OR51F2Q8NH61 342 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 CLDND2Q8NHS1 167 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 YIPF5Q969M3 257 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 MARS2Q96GW9 593 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 TPD52L3Q96J77 140 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 COG8Q96MW5 612 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 TBCCD1Q9NVR7 557 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 ABCD2Q9UBJ2 740 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 KLHL21Q9UJP4 597 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 NDRG4Q9ULP0 352 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 GRIP1Q9Y3R0 1128 aa12.37□□□□□ -0.43
SMARCE1-213ENST00000578044 LOC100509620A0A075B734 347 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 A0A087WUU8 490 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 C12orf71A8MTZ7 269 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 SLC2A10O95528 541 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 LCKP06239 509 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 CD14P08571 375 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 FAM157BP0CG42 384 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 GAAP10253 952 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 NAT2P11245 290 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 MSR1P21757 451 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 GDI2P50395 445 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 CTXN1P60606 82 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 MYBPC1Q00872 1141 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 LIPEQ05469 1076 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 SLC3A1Q07837 685 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 MAD2L1BPQ15013 274 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 LRRC18Q8N456 261 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 OR1J1Q8NGS3 322 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 RCN3Q96D15 328 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 RAB39BQ96DA2 213 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 ELMOD3Q96FG2 381 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 GPX7Q96SL4 187 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 OR2H1Q9GZK4 316 aa12.36□□□□□ -0.43
SMARCE1-213ENST00000578044 PPIAL4EA0A075B759 164 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 IGKV1D-43A0A0B4J1Z2 117 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 IGHV1-69-2A0A0G2JMI3 117 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 EFCAB9A8MZ26 197 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 PPIAL4DF5H284 164 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 LYNX1G3V0Z9 82 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 J3QLI3 93 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 CXCR6O00574 342 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 TCF21O43680 179 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 CLPTM1O96005 669 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 PPIAL4FP0DN26 164 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 LYNX1P0DP58 116 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 COX4I1P13073 169 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 MAKP20794 623 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 DRD4P21917 467 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 CPT2P23786 658 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 GCH1P30793 250 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 WNT5AP41221 380 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 GUCY1A3Q02108 690 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 ZBED5Q49AG3 693 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 HSP90B2PQ58FF3 399 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 GPR139Q6DWJ6 353 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 USP43Q70EL4 1123 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 FAM122BQ7Z309 247 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 CYP4Z1Q86W10 505 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 NPEPL1Q8NDH3 523 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 CMTM5Q96DZ9 223 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 C19orf24Q9BVV8 132 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 NMNAT1Q9HAN9 279 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 RPS6KA6Q9UK32 745 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 ENPP4Q9Y6X5 453 aa12.35□□□□□ -0.43
SMARCE1-213ENST00000578044 DOCK11Q5JSL3 2073 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 PLSCR5A0PG75 271 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms