RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 HADHBP55084 474 aaKnown RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 YWHAEP62258 255 aaKnown RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 QPRTQ15274 297 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 Q3ZCU0 254 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 THEM4Q5T1C6 240 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 CTRB2Q6GPI1 263 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 SLC25A25Q6KCM7 469 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 FAM122BQ7Z309 247 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZBED8Q8IZ13 594 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 CCDC54Q8NEL0 328 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 OR56A4Q8NGH8 313 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 MCOLN3Q8TDD5 553 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 CA5BP1Q8WTZ4 195 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 GEMIN6Q8WXD5 167 aaKnown RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 TOP1MTQ969P6 601 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 FAM131CQ96AQ9 280 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 TMEM101Q96IK0 257 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 CALN1Q9BXU9 219 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 MRM3Q9HC36 420 aaKnown RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 CD209Q9NNX6 404 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 TUBG2Q9NRH3 451 aa3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 NUFIP1Q9UHK0 495 aaKnown RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 COL22A1Q8NFW1 1626 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC8-203ENST00000577474 PIK3R4Q99570 1358 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 NEURL4Q96JN8 1562 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 A0A0G2JLM5 398 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 A0A0G2JN53 185 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 A0A1B0GVI7 797 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 PSMB11A5LHX3 300 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZFP92A6NM28 416 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RAD51CO43502 376 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 AQP8O94778 261 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 AIFM1O95831 613 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ARG1P05089 322 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RETP07949 1114 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 KRT16P08779 473 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 TDGF1P13385 188 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 PMCHP20382 165 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 OR1E1P30953 314 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 TDGF1P3P51864 188 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 PRPS1P60891 318 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 LCN2P80188 198 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 IGLV3-21P80748 117 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 SLC25A11Q02978 314 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 SLC1A5Q15758 541 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 LPAL2Q16609 132 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZBED5Q49AG3 693 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 TPRG1LQ5T0D9 272 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 TPTE2P1Q5T6R2 138 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ANKRD22Q5VYY1 191 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 C6orf89Q6UWU4 347 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 MBOAT1Q6ZNC8 495 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ABHD13Q7L211 337 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 OAFQ86UD1 273 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZNF547Q8IVP9 402 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ST13P4Q8IZP2 240 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ASCC1Q8N9N2 400 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 FBXO36Q8NEA4 188 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 OR4F15Q8NGB8 312 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 NUBPLQ8TB37 319 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ITFG1Q8TB96 612 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 DUS3LQ96G46 650 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 GPR21Q99679 349 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 TMEM38AQ9H6F2 299 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RPF2Q9H7B2 306 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RETNQ9HD89 108 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 CTPS2Q9NRF8 586 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 MCUBQ9NWR8 336 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 MTRF1LQ9UGC7 380 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 DDX19BQ9UMR2 479 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZNF256Q9Y2P7 627 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 YARS2Q9Y2Z4 477 aaKnown RBP3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 UBN2Q6ZU65 1347 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 ADGRA3Q8IWK6 1321 aa3.39□□□□□ -1.87
TRAPPC8-203ENST00000577474 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 ZNF99A8MXY4 864 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 E7EWF7 191 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 K7ERQ8 282 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 PEX7O00628 323 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 SIVA1O15304 175 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 POLR3GO15318 223 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 DPM1O60762 260 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 SRP72O76094 671 aaKnown RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 ETHE1O95571 254 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 RAB3DO95716 219 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 GIG44P09565 113 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 IGHV3-43DP0DP04 118 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 NR2C1P13056 603 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 WARSP23381 471 aaKnown RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 GABRR2P28476 465 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 GPX4P36969 197 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 RFC3P40938 356 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 CSKP41240 450 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 CD151P48509 253 aa3.38□□□□□ -1.87
TRAPPC8-203ENST00000577474 NUTF2P61970 127 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms