RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RAG2P55895 527 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 PPP1CBP62140 327 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
COPS3-214ENST00000577246 PAX8Q06710 450 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 KRT71Q3SY84 523 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 MTX3Q5HYI7 312 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 ZNF283Q8N7M2 679 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 SAMD8Q96LT4 415 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 MCHR1Q99705 422 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 PKP2Q99959 881 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 SMURF2Q9HAU4 748 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
COPS3-214ENST00000577246 F5H0A9 414 aaPredicted RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 IFNL4K9M1U5 179 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 ICMTO60725 284 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 PLATP00750 562 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 GSTM3P21266 225 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 TUBG1P23258 451 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 WNT5AP41221 380 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 BPIFB3P59826 476 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 CDK5R2Q13319 367 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 SCARB2Q14108 478 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 PDCD1Q15116 288 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 TAF11Q15544 211 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 OLFML2AQ68BL7 652 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 VANGL1Q8TAA9 524 aaPredicted RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 UPRTQ96BW1 309 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 MPP4Q96JB8 637 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 MAELQ96JY0 434 aaKnown RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 MAGEB18Q96M61 343 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 ZNF347Q96SE7 839 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 CITED1Q99966 193 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 SLC30A2Q9BRI3 323 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 TMEM38AQ9H6F2 299 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 KCNK9Q9NPC2 374 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 PDP1Q9P0J1 537 aaPredicted RBP11.24□□□□□ -0.61
COPS3-214ENST00000577246 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
COPS3-214ENST00000577246 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 SRRM5B3KS81 715 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 TPST2O60704 377 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 NDUFA7O95182 113 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 NGFP01138 241 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 ASAH2BP0C7U1 165 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 IGHV4-38-2P0DP08 117 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 KITP10721 976 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 ACADSP16219 412 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 ZNF32P17041 273 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 ZNF133P52736 654 aaPredicted RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 PCBD1P61457 104 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 SEC61A1P61619 476 aaKnown RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 ZMYND11Q15326 602 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 SLC2A7Q6PXP3 512 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 RFPL4BQ6ZWI9 263 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 OR9I1Q8NGQ6 314 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
COPS3-214ENST00000577246 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 IL19Q9UHD0 177 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
COPS3-214ENST00000577246 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 EVPLLA8MZ36 301 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
COPS3-214ENST00000577246 HOXB9P17482 250 aaPredicted RBP11.22□□□□□ -0.61
COPS3-214ENST00000577246 AQP1P29972 269 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 CD80P33681 288 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 STX1BP61266 288 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 SGCAQ16586 387 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 ENTPD8Q5MY95 495 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 LRIF1Q5T3J3 769 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 AKR7LQ8NHP1 331 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 ADAMTS16Q8TE57 1224 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 KIF17Q9P2E2 1029 aa11.22□□□□□ -0.61
COPS3-214ENST00000577246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.22□□□□□ -0.61
COPS3-214ENST00000577246 WNK2Q9Y3S1 2297 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms