RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ESCO2Q56NI9 601 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 HSP90B2PQ58FF3 399 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF362Q5T0B9 420 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 AGBL2Q5U5Z8 902 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 NXNQ6DKJ4 435 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 DHRS4L2Q6PKH6 230 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 SLC2A7Q6PXP3 512 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 LINC00114Q6XXX2 140 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 RFPL4BQ6ZWI9 263 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF283Q8N7M2 679 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 OR9I1Q8NGQ6 314 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ABHD4Q8TB40 342 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 UBE2FQ969M7 185 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 UPRTQ96BW1 309 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 SIGLEC11Q96RL6 698 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 TMEM43Q9BTV4 400 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 CHIAQ9BZP6 476 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 PAIP1Q9H074 479 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 RMND5AQ9H871 391 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 MARCH7Q9H992 704 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 CYSLTR2Q9NS75 346 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 OR5V1Q9UGF6 321 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 TANC2Q9HCD6 1990 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 IGKV1D-43A0A0B4J1Z2 117 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 CEACAM18A8MTB9 384 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 KPNA4O00629 521 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 TRMUO75648 421 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 THY1P04216 161 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 F13BP05160 661 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 KITP10721 976 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 THRBP10828 461 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 GDI2P50395 445 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF84P51523 738 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 NCALDP61601 193 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 PPP1CBP62140 327 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 ERVK-25P63136 954 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 BST1Q10588 318 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 PSG7Q13046 419 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 MPP2Q14168 576 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SGCAQ16586 387 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 NRN1LQ496H8 165 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 MTX3Q5HYI7 312 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 HHATQ5VTY9 493 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 LRRN1Q6UXK5 716 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 Q6YL49 198 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 OR2Z1Q8NG97 314 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 FAM110DQ8TAY7 271 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 RAB40AQ8WXH6 277 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 GTF2H4Q92759 462 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 ZBTB9Q96C00 473 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SAMD8Q96LT4 415 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 MCHR1Q99705 422 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 MRPL13Q9BYD1 178 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SLC19A3Q9BZV2 496 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 KCNN2Q9H2S1 579 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 PRDM13Q9H4Q3 707 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 NANOGQ9H9S0 305 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SIAEQ9HAT2 523 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 TMEM165Q9HC07 324 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 CCNB1IP1Q9NPC3 277 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 NANSQ9NR45 359 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SLC25A37Q9NYZ2 338 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 SLAMF8Q9P0V8 285 aa8.47□□□□□ -1.05
NPLOC4-220ENST00000576940 BLOC1S5-TXNDC5H3BN57 136 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 M0R3H8 397 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 TIMM8AO60220 97 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 TGDSO95455 350 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC2A10O95528 541 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 TSPAN15O95858 294 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 IGHG1P01857 330 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 PPIAL4GP0DN37 164 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 UMPSP11172 480 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 AQP1P29972 269 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 POLR2JP52435 117 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 CDK6Q00534 326 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 FADDQ13158 208 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 TAF9Q16594 264 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 RUNDC3AQ59EK9 446 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 GCNT6Q5T4J0 391 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 REEP3Q6NUK4 255 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF774Q6NX45 483 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 BTNL3Q6UXE8 466 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 Q6ZR03 302 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 RBM45Q8IUH3 476 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 SMYD1Q8NB12 490 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 ITLN1Q8WWA0 313 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 NSMAFQ92636 917 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 NABP1Q96AH0 204 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 SPATA5L1Q9BVQ7 753 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 POFUT1Q9H488 388 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 TMBIM4Q9HC24 238 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 IL20RAQ9UHF4 553 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC13A4Q9UKG4 626 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 PPP1R3CQ9UQK1 317 aa8.46□□□□□ -1.06
NPLOC4-220ENST00000576940 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms