RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PGA4P0DJD7 388 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 PGA3P0DJD8 388 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 IDO1P14902 403 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 CD80P33681 288 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ETV4P43268 484 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 RGNQ15493 299 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 DEFB112Q30KQ8 113 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 GTDC1Q4AE62 458 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 GCNT6Q5T4J0 391 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 NANOGNBQ7Z5D8 188 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ALDH16A1Q8IZ83 802 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ZNF283Q8N7M2 679 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 OR10S1Q8NGN2 331 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 NFKBIDQ8NI38 313 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 MCHR2Q969V1 340 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 SAMD8Q96LT4 415 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 MAGEB18Q96M61 343 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ZNF607Q96SK3 696 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 ARHGDIGQ99819 225 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 TCF7L1Q9HCS4 588 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 DCAF16Q9NXF7 216 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 C1RLQ9NZP8 487 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.03□□□□□ -0.8
CTNS-208ENST00000574218 PPP1R3CQ9UQK1 317 aa10.03□□□□□ -0.8
CTNS-208ENST00000574218 SOX21Q9Y651 276 aaPredicted RBP10.03□□□□□ -0.8
CTNS-208ENST00000574218 IGHV2-70DA0A0C4DH43 119 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 A0A1W2PRG6 482 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 TRPC5OSA6NMA1 111 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 CEACAM18A8MTB9 384 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 CLIC1O00299 241 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 SDHDO14521 159 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 SERPINB7O75635 380 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 CH25HO95992 272 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 ZNF32P17041 273 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 GSTM3P21266 225 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 CPT2P23786 658 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 WNT5AP41221 380 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 GUCA1AP43080 201 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 CDH12P55289 794 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 BPIFB3P59826 476 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 STX3Q13277 289 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 ZMYND11Q15326 602 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 C2orf68Q2NKX9 166 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 HHATQ5VTY9 493 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 ASPHD2Q6ICH7 369 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 REEP3Q6NUK4 255 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 TTC33Q6PID6 262 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 RFPL4BQ6ZWI9 263 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 TMEM86BQ8N661 226 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 NOXO1Q8NFA2 376 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 RAB40AQ8WXH6 277 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 FAM71F1Q96KD3 344 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 POM121L2Q96KW2 1035 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 ZNF347Q96SE7 839 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 SORT1Q99523 831 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 ROPN1BQ9BZX4 212 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 ROPN1Q9HAT0 212 aaPredicted RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 SIAEQ9HAT2 523 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 PNPOQ9NVS9 261 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
CTNS-208ENST00000574218 MIOXQ9UGB7 285 aa10.02□□□□□ -0.81
CTNS-208ENST00000574218 GMNCA6NCL1 334 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 CENPBD1B2RD01 187 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 IFNL4K9M1U5 179 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 CHP2O43745 196 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 TYROBPO43914 113 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 BMP2P12643 396 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 NR2C1P13056 603 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 SELEP16581 610 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 BGNP21810 368 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 DAP3P51398 398 aaKnown RBP10.01□□□□□ -0.81
CTNS-208ENST00000574218 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
CTNS-208ENST00000574218 CDK6Q00534 326 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 CDK5R2Q13319 367 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 SGCAQ16586 387 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 ZNF74Q16587 644 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 ZNF613Q6PF04 617 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 ZNF620Q6ZNG0 422 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 RHOUQ7L0Q8 258 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
CTNS-208ENST00000574218 NLRC3Q7RTR2 1065 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 NPEPL1Q8NDH3 523 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 VANGL1Q8TAA9 524 aaPredicted RBP10.01□□□□□ -0.81
CTNS-208ENST00000574218 TBC1D15Q8TC07 691 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 ITLN1Q8WWA0 313 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNS-208ENST00000574218 NEIL1Q96FI4 390 aaPredicted RBP10.01□□□□□ -0.81
CTNS-208ENST00000574218 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 MCHR1Q99705 422 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 CHIAQ9BZP6 476 aa10.01□□□□□ -0.81
CTNS-208ENST00000574218 C20orf27Q9GZN8 174 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms