RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MDP1Q86V88 176 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 LNX2Q8N448 690 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 OR52E2Q8NGJ4 325 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 OR4K13Q8NH42 304 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 AKAP1Q92667 903 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD3-216ENST00000573936 SH3GL3Q99963 347 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 OSBPL10Q9BXB5 764 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PLA2G12AQ9BZM1 189 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SYT4Q9H2B2 425 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SEMA6AQ9H2E6 1030 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 CXXC4Q9H2H0 198 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 C1orf198Q9H425 327 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 RNPEPL1Q9HAU8 725 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 REV1Q9UBZ9 1251 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 ENOPH1Q9UHY7 261 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 ST6GALNAC2Q9UJ37 374 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 POU2F3Q9UKI9 436 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 UGT2A1Q9Y4X1 527 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 FKBP7Q9Y680 259 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 A0A1W2PPR1 153 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 C12orf71A8MTZ7 269 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 SHISA9B4DS77 424 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 TMCC2O75069 709 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 RAF1P04049 648 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 TP53P04637 393 aaPredicted RBP9.59□□□□□ -0.87
CHD3-216ENST00000573936 HMGN1P05114 100 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 CECR9P0C854 216 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 POU1F1P28069 291 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 CDAP32320 146 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 GRK5P34947 590 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
CHD3-216ENST00000573936 CDH11P55287 796 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NAAAQ02083 359 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NPRL3Q12980 569 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 KEAP1Q14145 624 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 SLC36A3Q495N2 470 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 SLC27A4Q6P1M0 643 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 FAHD1Q6P587 224 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 PAMR1Q6UXH9 720 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 GLB1L2Q8IW92 636 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 LRRC18Q8N456 261 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 ZNF611Q8N823 705 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 OR4F15Q8NGB8 312 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 OR8D4Q8NGM9 314 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 FBXW5Q969U6 566 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NABP1Q96AH0 204 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NMNAT3Q96T66 252 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 NUAK2Q9H093 628 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 RACGAP1Q9H0H5 632 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 GABARAPL1Q9H0R8 117 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 LIME1Q9H400 295 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 POLE4Q9NR33 117 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 PAPOLBQ9NRJ5 636 aaKnown RBP9.59□□□□□ -0.87
CHD3-216ENST00000573936 CISD1Q9NZ45 108 aaKnown RBP9.59□□□□□ -0.87
CHD3-216ENST00000573936 ZNF224Q9NZL3 707 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 B9D1Q9UPM9 204 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 COA3Q9Y2R0 106 aaPredicted RBP9.59□□□□□ -0.87
CHD3-216ENST00000573936 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
CHD3-216ENST00000573936 IQCMA0A1B0GVH7 501 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ZNF503-AS2A6NEH8 195 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 VSTM5A8MXK1 200 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 SERPINA5P05154 406 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 IGFBP1P08833 259 aaPredicted RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 CTLA4P16410 223 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ZNF14P17017 642 aaPredicted RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 ZNF3P17036 446 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 GIPRP48546 466 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 CENPAP49450 140 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 DAPP51397 102 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 LSM6P62312 80 aaKnown RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 ESRRGP62508 458 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 CDK5Q00535 292 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 HSF2Q03933 536 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 GLO1Q04760 184 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ETFDHQ16134 617 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 PGGHGQ32M88 737 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ZBTB46Q86UZ6 589 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 PARP8Q8N3A8 854 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 SLC37A3Q8NCC5 494 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ICA1LQ8NDH6 482 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 SDR9C7Q8NEX9 313 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 KBTBD8Q8NFY9 601 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 OR4Q3Q8NH05 313 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 LILRB1Q8NHL6 650 aaPredicted RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 PIGTQ969N2 578 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 ZNF75AQ96N20 296 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 GSX1Q9H4S2 264 aaPredicted RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 RERGLQ9H628 205 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 SRA1Q9HD15 236 aaKnown RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 RPRD1BQ9NQG5 326 aaKnown RBP9.58□□□□□ -0.88
CHD3-216ENST00000573936 KRT84Q9NSB2 600 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 FAIMQ9NVQ4 179 aa9.58□□□□□ -0.88
CHD3-216ENST00000573936 MOKQ9UQ07 419 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms