RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SLC38A2Q96QD8 506 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
RPAIN-213ENST00000573577 RBM4Q9BWF3 364 aaKnown RBP11.79□□□□□ -0.52
RPAIN-213ENST00000573577 C1QTNF6Q9BXI9 259 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 NUAK2Q9H093 628 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 RERGLQ9H628 205 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 RNF121Q9H920 327 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 CRNNQ9UBG3 495 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-213ENST00000573577 UGT2A1Q9Y4X1 527 aa11.79□□□□□ -0.52
RPAIN-213ENST00000573577 RAI1Q7Z5J4 1906 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-213ENST00000573577 SAC3D1A6NKF1 404 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 ABCD4O14678 606 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 HLA-HP01893 362 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-213ENST00000573577 MSR1P21757 451 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 IGFBP5P24593 272 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 LAP3P28838 519 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 CDAP32320 146 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 GRK5P34947 590 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 GIPRP48546 466 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 PTDSS1P48651 473 aaKnown RBP11.78□□□□□ -0.52
RPAIN-213ENST00000573577 PCBD1P61457 104 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 RAB1AP62820 205 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 GLO1Q04760 184 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 NPRL3Q12980 569 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 GINS1Q14691 196 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-213ENST00000573577 FAM27BQ5VT28 67 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 KDM4DQ6B0I6 523 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 FOXL2NBQ6ZUU3 175 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 MDP1Q86V88 176 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 IL17RDQ8NFM7 739 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 NEUROG1Q92886 237 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 FBXW5Q969U6 566 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 WACQ9BTA9 647 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 PRRG3Q9BZD7 231 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 RACGAP1Q9H0H5 632 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 CCNB1IP1Q9NPC3 277 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 RPRD1BQ9NQG5 326 aaKnown RBP11.78□□□□□ -0.52
RPAIN-213ENST00000573577 B3GNT2Q9NY97 397 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 ORC6Q9Y5N6 252 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 FKBP7Q9Y680 259 aa11.78□□□□□ -0.52
RPAIN-213ENST00000573577 SHISA9B4DS77 424 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 SMPD2O60906 423 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 BAG2O95816 211 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 PTHP01270 115 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 CRYAAP02489 173 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 CST2P09228 141 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 PAICSP22234 425 aaKnown RBP11.77□□□□□ -0.53
RPAIN-213ENST00000573577 CENPAP49450 140 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-213ENST00000573577 CRISP1P54107 249 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 PLP2Q04941 152 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 PIGFQ07326 219 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 ETFDHQ16134 617 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 IQCF1Q8N6M8 205 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 SLC37A3Q8NCC5 494 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 PLEKHA8Q96JA3 519 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 C1orf198Q9H425 327 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
RPAIN-213ENST00000573577 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 CMC2Q9NRP2 79 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 ZNF224Q9NZL3 707 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-213ENST00000573577 HIVEP1P15822 2718 aa11.77□□□□□ -0.53
RPAIN-213ENST00000573577 IGHV1-18A0A0C4DH31 117 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 TMCC2O75069 709 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 CECR9P0C854 216 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 CDH11P55287 796 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 LSM6P62312 80 aaKnown RBP11.76□□□□□ -0.53
RPAIN-213ENST00000573577 PPP2R2BQ00005 443 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 CDK5Q00535 292 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 HSF2Q03933 536 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 SPOCK1Q08629 439 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 SYT9Q86SS6 491 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 OR6V1Q8N148 313 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 CYB561A3Q8NBI2 242 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 PROKR2Q8NFJ6 384 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 TSSK2Q96PF2 358 aa11.76□□□□□ -0.53
RPAIN-213ENST00000573577 CIB1Q99828 191 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms