RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LYNX1P0DP58 116 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 DAOP14920 347 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 ZNF23P17027 643 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 TCN1P20061 433 aaPredicted RBP14.83□□□□□ -0.04
SMG6-212ENST00000573153 IGFBP5P24593 272 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 ALDH3B1P43353 468 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 SMIM11AP58511 58 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 DEFB107AQ8IZN7 70 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 FITM2Q8N6M3 262 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 OR1J2Q8NGS2 313 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 POM121L2Q96KW2 1035 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 NSMCE2Q96MF7 247 aa14.83□□□□□ -0.04
SMG6-212ENST00000573153 LOC100509620A0A075B734 347 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 IQCMA0A1B0GVH7 501 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 NDUFB2O95178 105 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 CLPTM1O96005 669 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ERCC1P07992 297 aaPredicted RBP14.82□□□□□ -0.04
SMG6-212ENST00000573153 CST2P09228 141 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 FAM157BP0CG42 384 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ZNF250P15622 560 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ZNF32P17041 273 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 WNT5AP41221 380 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 PLP2Q04941 152 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ENDOGQ14249 297 aaKnown RBP14.82□□□□□ -0.04
SMG6-212ENST00000573153 SEC23BQ15437 767 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 TRIP10Q15642 601 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 TBC1D28Q2M2D7 210 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 MESTQ5EB52 335 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 GKAP1Q5VSY0 366 aaPredicted RBP14.82□□□□□ -0.04
SMG6-212ENST00000573153 ZNF101Q8IZC7 436 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ARHGAP24Q8N264 748 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 LRRC18Q8N456 261 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 YIPF5Q969M3 257 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 C1orf159Q96HA4 380 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 FAM46AQ96IP4 442 aaKnown RBP14.82□□□□□ -0.04
SMG6-212ENST00000573153 GPA33Q99795 319 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 WACQ9BTA9 647 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 WNT5BQ9H1J7 359 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 KCNN2Q9H2S1 579 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 RNF121Q9H920 327 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 IL1RAPQ9NPH3 570 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 KRCC1Q9NPI7 259 aaPredicted RBP14.82□□□□□ -0.04
SMG6-212ENST00000573153 NRIP3Q9NQ35 241 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 GRHPRQ9UBQ7 328 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 ADAM18Q9Y3Q7 739 aa14.82□□□□□ -0.04
SMG6-212ENST00000573153 LRP5LA4QPB2 252 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 M0R233 179 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 IMPA2O14732 288 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 ICMTO60725 284 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 RP2O75695 350 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 APEX1P27695 318 aaKnown RBP14.81□□□□□ -0.04
SMG6-212ENST00000573153 ERVK-25P63136 954 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 PSG4Q00888 419 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 PABPC1L2AQ5JQF8 200 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 FGD3Q5JSP0 725 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 CYB5R2Q6BCY4 276 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 GPR139Q6DWJ6 353 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 THSD4Q6ZMP0 1018 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 SYT9Q86SS6 491 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 UBASH3BQ8TF42 649 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 NSMAFQ92636 917 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 GTF3AQ92664 365 aaKnown RBP14.81□□□□□ -0.04
SMG6-212ENST00000573153 RSRC1Q96IZ7 334 aaKnown RBP14.81□□□□□ -0.04
SMG6-212ENST00000573153 RACGAP1Q9H0H5 632 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 LRMDAQ9H2I8 198 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 CDH20Q9HBT6 801 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 DYNLRB1Q9NP97 96 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 REV1Q9UBZ9 1251 aa14.81□□□□□ -0.04
SMG6-212ENST00000573153 PRSS37A4D1T9 235 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 H7C1C5 153 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 DIRAS1O95057 198 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 TXNDC12O95881 172 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
SMG6-212ENST00000573153 COL8A2P25067 703 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 SDHAP31040 664 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MSX2P35548 267 aaPredicted RBP14.8□□□□□ -0.04
SMG6-212ENST00000573153 RPL4P36578 427 aaKnown RBP14.8□□□□□ -0.04
SMG6-212ENST00000573153 PCBD1P61457 104 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 LCN6P62502 163 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 SGCAQ16586 387 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MTX3Q5HYI7 312 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 ZNF540Q8NDQ6 660 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MCUR1Q96AQ8 359 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 NSL1Q96IY1 281 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 Q96M85 177 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 ZNF570Q96NI8 536 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 BCL2L14Q9BZR8 327 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MUC13Q9H3R2 512 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MS4A5Q9H3V2 200 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 CCNB1IP1Q9NPC3 277 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 FAM53CQ9NYF3 392 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 VSX1Q9NZR4 365 aaPredicted RBP14.8□□□□□ -0.04
SMG6-212ENST00000573153 ACTR3BQ9P1U1 418 aa14.8□□□□□ -0.04
SMG6-212ENST00000573153 MXRA5Q9NR99 2828 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 UNC119BA6NIH7 251 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 COL6A5A8TX70 2615 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 XKRYO14609 159 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 WNT9BO14905 357 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 GADD45GO95257 159 aa14.79□□□□□ -0.04
SMG6-212ENST00000573153 FABP3P05413 133 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms