RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 THBS4P35443 961 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 ACVR1BP36896 505 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 WNT5AP41221 380 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 MNAT1P51948 309 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 UBE2NP61088 152 aaKnown RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 PPP1R8Q12972 351 aaKnown RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 KRR1Q13601 381 aaKnown RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 RAB39AQ14964 217 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 FAM205BPQ63HN1 556 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 UGT2A3Q6UWM9 527 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 CYP4Z1Q86W10 505 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 CCDC36Q8IYA8 594 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 Q96MF0 132 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 SORCS2Q96PQ0 1159 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 WNT5BQ9H1J7 359 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 OR52D1Q9H346 318 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 B3GAT2Q9NPZ5 323 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
SMG6-210ENST00000572205 SLC7A8Q9UHI5 535 aa7.48□□□□□ -1.21
SMG6-210ENST00000572205 LOC100509620A0A075B734 347 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ARPC3O15145 178 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 LY6HO94772 140 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 UBL3O95164 117 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 NDUFB2O95178 105 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 HIST1H2ABP04908 130 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 SERPINA5P05154 406 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 OR8G3PP0DMU2 310 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 APEHP13798 732 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 CD99P14209 185 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ZNF32P17041 273 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 NR4A1P22736 598 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 PAX7P23759 505 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 APOBEC3AP31941 199 aaPredicted RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 PTDSS1P48651 473 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 ATP5J2P56134 94 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 CLRN1P58418 232 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ERVS71-1P61550 626 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 RAB1AP62820 205 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 MXRA7P84157 204 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 PIGFQ07326 219 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 NPRL3Q12980 569 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 TSPAN31Q12999 210 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 FAM27BQ5VT28 67 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 OTPQ5XKR4 325 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 SMARCD3Q6STE5 483 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 RFPL4BQ6ZWI9 263 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 HIST3H2AQ7L7L0 130 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 HDDC2Q7Z4H3 204 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 DHFR2Q86XF0 187 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ZNF101Q8IZC7 436 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 PAPD5Q8NDF8 572 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 OR10H5Q8NGA6 315 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 FANK1Q8TC84 345 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 CHAC2Q8WUX2 184 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 CANT1Q8WVQ1 401 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ZNRF4Q8WWF5 429 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 HIST1H2ACQ93077 130 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 POM121L2Q96KW2 1035 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ZNF570Q96NI8 536 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 DOK1Q99704 481 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ZNF416Q9BWM5 594 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 MRPL37Q9BZE1 423 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 TRIM15Q9C019 465 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 CXorf56Q9H5V9 222 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 DENND2DQ9H6A0 471 aaPredicted RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 SIAEQ9HAT2 523 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 MOV10Q9HCE1 1003 aaKnown RBP7.47□□□□□ -1.21
SMG6-210ENST00000572205 POLE4Q9NR33 117 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 POMPQ9Y244 141 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 POFUT2Q9Y2G5 429 aa7.47□□□□□ -1.21
SMG6-210ENST00000572205 ANK2Q01484 3957 aa7.46□□□□□ -1.21
SMG6-210ENST00000572205 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.21
SMG6-210ENST00000572205 IGLV3-9A0A075B6K5 115 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 IGHV4-30-2A0A087WSY4 118 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 UNC119BA6NIH7 251 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 SLC22A31A6NKX4 558 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 AQP12BA6NM10 295 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 VWC2LB2RUY7 222 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 H7C1Q1 480 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 PPP1R3DO95685 299 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 GPANK1O95872 356 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 CRYAAP02489 173 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 CD79AP11912 226 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 CCL2P13500 99 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 FOSL1P15407 271 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 ITGA2P17301 1181 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 LAP3P28838 519 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 FABP6P51161 128 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 HIST1H3AP68431 136 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 PSG4Q00888 419 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 CD47Q08722 323 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 TRAP1Q12931 704 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms