RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 IL20RAQ9UHF4 553 aa12.56□□□□□ -0.4
LITAF-208ENST00000571627 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
LITAF-208ENST00000571627 TMEM129A0AVI4 362 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 CCNB2O95067 398 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 CCL2P13500 99 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 APEHP13798 732 aaKnown RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 GSSP48637 474 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 RPS6KA3P51812 740 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 EFNA4P52798 201 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 MRPS34P82930 218 aaKnown RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 TSPAN31Q12999 210 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 SGCAQ16586 387 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 RFX4Q33E94 735 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 SLC36A2Q495M3 483 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 TMEM53Q6P2H8 277 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 FAM122BQ7Z309 247 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 ZCCHC24Q8N2G6 241 aaKnown RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 FANK1Q8TC84 345 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 CANT1Q8WVQ1 401 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 Q96M85 177 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 ZNF570Q96NI8 536 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 GPA33Q99795 319 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 RHNO1Q9BSD3 238 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 OR51B6Q9H340 312 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 FZR1Q9UM11 496 aa12.55□□□□□ -0.4
LITAF-208ENST00000571627 SAMHD1Q9Y3Z3 626 aaKnown RBP12.55□□□□□ -0.4
LITAF-208ENST00000571627 A0A1W2PPL8 197 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 TCRBV3S1A0A5B6 114 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 IMPA2O14732 288 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 F12P00748 615 aaPredicted RBP12.54□□□□□ -0.4
LITAF-208ENST00000571627 CST1P01037 141 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
LITAF-208ENST00000571627 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SDHAP31040 664 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SLC6A6P31641 620 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 PPOXP50336 477 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 FXYD6P3P58550 94 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 GALK2Q01415 458 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 MICAQ29983 383 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 MESTQ5EB52 335 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 RPL13AP3Q6NVV1 102 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 CCDC121Q6ZUS5 278 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SLC30A7Q8NEW0 376 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 C10orf105Q8TEF2 133 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 FAM168AQ92567 244 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 RASD2Q96D21 266 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 DOK1Q99704 481 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 MRPL37Q9BZE1 423 aaKnown RBP12.54□□□□□ -0.4
LITAF-208ENST00000571627 LRMDAQ9H2I8 198 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 KCNN2Q9H2S1 579 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 OR52D1Q9H346 318 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SIAEQ9HAT2 523 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 SPEF1Q9Y4P9 236 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 FKBP7Q9Y680 259 aa12.54□□□□□ -0.4
LITAF-208ENST00000571627 A0A096LNT2 108 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 TEX13CA0A0J9YWL9 993 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 PRSS37A4D1T9 235 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 GNGT2O14610 69 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 IDH3BO43837 385 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 TXNDC12O95881 172 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 ZNF32P17041 273 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 APEX1P27695 318 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 PCSK6P29122 969 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 DSCR9P59020 149 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 HSF2Q03933 536 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 ZNF770Q6IQ21 691 aaPredicted RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 ADCK1Q86TW2 530 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 CPEB3Q8NE35 698 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 OR9Q2Q8NGE9 314 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 MRPL24Q96A35 216 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 CDH20Q9HBT6 801 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 DYNLRB1Q9NP97 96 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
LITAF-208ENST00000571627 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 U3KQV3 271 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
LITAF-208ENST00000571627 ANK3Q12955 4377 aaKnown RBP12.52□□□□□ -0.4
LITAF-208ENST00000571627 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
LITAF-208ENST00000571627 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
LITAF-208ENST00000571627 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
LITAF-208ENST00000571627 ARPC3O15145 178 aa12.52□□□□□ -0.41
LITAF-208ENST00000571627 PTHP01270 115 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms