RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, human

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-204	ENST00000571554	RBP7	Q96R05	134 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	ALG12	Q9BV10	488 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	MYLK2	Q9H1R3	596 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	LRMDA	Q9H2I8	198 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	C1orf198	Q9H425	327 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	TMEM160	Q9NX00	188 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	LPAR3	Q9UBY5	353 aa		11.77	□□□□□ -0.53
RAB40B-204	ENST00000571554	LOC100509620	A0A075B734	347 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	SLC22A23	A1A5C7	686 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	C5orf49	A4QMS7	147 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	NPIPB13	A6NJU9	1138 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	NPIPB4	C9JG80	1138 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	SNAP29	O95721	258 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	SCG5	P05408	212 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	RAD52	P43351	418 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	GPR6	P46095	362 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	GYS2	P54840	703 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	PSG4	Q00888	419 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	CR1L	Q2VPA4	569 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	TMEM255A	Q5JRV8	349 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	FGD3	Q5JSP0	725 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	UGT2A3	Q6UWM9	527 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	HACD2	Q6Y1H2	254 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	MBOAT2	Q6ZWT7	520 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	PHC2	Q8IXK0	858 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF101	Q8IZC7	436 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	C11orf40	Q8WZ69	217 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	RDH5	Q92781	318 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554		Q96M85	177 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	WNT5B	Q9H1J7	359 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	SMURF2	Q9HAU4	748 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	LPAR2	Q9HBW0	351 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	EMC7	Q9NPA0	242 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	HINT3	Q9NQE9	182 aa	Known RBP	11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	ADA2	Q9NZK5	511 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	ABCD2	Q9UBJ2	740 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	IL20RA	Q9UHF4	553 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	ENPP4	Q9Y6X5	453 aa		11.76	□□□□□ -0.53
RAB40B-204	ENST00000571554	IGLV3-9	A0A075B6K5	115 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554		A6NIZ1	184 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	C17orf100	A8MU93	164 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	IMPA2	O14732	288 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	PPIH	O43447	177 aa	Known RBP	11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	NR2C1	P13056	603 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF250	P15622	560 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	DRD4	P21917	467 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	MPV17	P39210	176 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	GDI2	P50395	445 aa	Known RBP	11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	SELENOV	P59797	346 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RAP1B	P61224	184 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RAP1A	P62834	184 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	HNRNPA0	Q13151	305 aa	Known RBP	11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	ENDOG	Q14249	297 aa	Known RBP	11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	TAF11	Q15544	211 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	TST	Q16762	297 aa	Known RBP	11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZBED5	Q49AG3	693 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	MEST	Q5EB52	335 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	THEM4	Q5T1C6	240 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	AVPI1	Q5T686	147 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	GLYAT	Q6IB77	296 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF774	Q6NX45	483 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	TMEM154	Q6P9G4	183 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RFPL4B	Q6ZWI9	263 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RRM2B	Q7LG56	351 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	CYP4Z1	Q86W10	505 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	CLDND2	Q8NHS1	167 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	SLC7A13	Q8TCU3	470 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	SNX33	Q8WV41	574 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RASD2	Q96D21	266 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	CMTM5	Q96DZ9	223 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	POM121L2	Q96KW2	1035 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	BCL2L14	Q9BZR8	327 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	OR2H1	Q9GZK4	316 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	RERGL	Q9H628	205 aa		11.75	□□□□□ -0.53
RAB40B-204	ENST00000571554	TEX13C	A0A0J9YWL9	993 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	TRBV4-1	A0A0J9YWV2	114 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	TPD52L2	O43399	206 aa	Known RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	H1F0	P07305	194 aa	Known RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	ACHE	P22303	614 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	MSX2	P35548	267 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	CDH15	P55291	814 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	SEC23B	Q15437	767 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	FAM27B	Q5VT28	67 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	FAM205BP	Q63HN1	556 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	RINL	Q6ZS11	566 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	TMPRSS11F	Q6ZWK6	438 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	RNF113B	Q8IZP6	322 aa	Known RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	LINC01356	Q8N9X3	169 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	OR52J3	Q8NH60	311 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	ABHD4	Q8TB40	342 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	SLC25A40	Q8TBP6	338 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF570	Q96NI8	536 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	ZNF416	Q9BWM5	594 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	OR2J1	Q9GZK6	312 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	SPAG4	Q9NPE6	437 aa		11.74	□□□□□ -0.53
RAB40B-204	ENST00000571554	TREM2	Q9NZC2	230 aa		11.74	□□□□□ -0.53

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