RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 OR5K1Q8NHB7 308 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 AKR7LQ8NHP1 331 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 C11orf40Q8WZ69 217 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 POP5Q969H6 163 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 RBP7Q96R05 134 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 ZNF416Q9BWM5 594 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 WNT5BQ9H1J7 359 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 RERGLQ9H628 205 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 MED20Q9H944 212 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SRA1Q9HD15 236 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 RPRD1BQ9NQG5 326 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 POLE4Q9NR33 117 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 TBC1D23Q9NUY8 699 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 CISD1Q9NZ45 108 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 TMEFF2Q9UIK5 374 aaPredicted RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 B9D1Q9UPM9 204 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 LOC100509620A0A075B734 347 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 FAM183AA6NL82 134 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 XKRYO14609 159 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 GPRIN2O60269 458 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 NDUFS7O75251 213 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 DEAF1O75398 565 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 KHDRBS3O75525 346 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 TFP02787 698 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 RAF1P04049 648 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 GYPBP06028 91 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 OSMP13725 252 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 FASP25445 335 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 APEX1P27695 318 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 POU1F1P28069 291 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ARR3P36575 388 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 POLR2IP36954 125 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 CDKN1AP38936 164 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 RPS27P42677 84 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 ZNF84P51523 738 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ERVS71-1P61550 626 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 NKX6-1P78426 367 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 CDK5Q00535 292 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 PSG4Q00888 419 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 GINS1Q14691 196 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 MST1LQ2TV78 715 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 C3orf36Q3SXR2 165 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 NRN1LQ496H8 165 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 CCDC92Q53HC0 331 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 PABPC1L2AQ5JQF8 200 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 FAM27BQ5VT28 67 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 C11orf71Q6IPW1 123 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 KRT80Q6KB66 452 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ZNF774Q6NX45 483 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 HDDC2Q7Z4H3 204 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 ADCK1Q86TW2 530 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ZBTB46Q86UZ6 589 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 JAZF1Q86VZ6 243 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ZNF611Q8N823 705 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 FAM169BQ8N8A8 192 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 OR51L1Q8NGJ5 315 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 SMAP2Q8WU79 429 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 SLC7A6Q92536 515 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 RADILQ96JH8 1075 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 SNX18Q96RF0 628 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 RBM4Q9BWF3 364 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 NMNAT2Q9BZQ4 307 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 OR2H1Q9GZK4 316 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 GABARAPL1Q9H0R8 117 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 YY1AP1Q9H869 796 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 SIAEQ9HAT2 523 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 NGBQ9NPG2 151 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 MRPL22Q9NWU5 206 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 STX18Q9P2W9 335 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 OAZ3Q9UMX2 235 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 LAMP3Q9UQV4 416 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ATP23Q9Y6H3 246 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 MAP1AP78559 2803 aaPredicted RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 CHD3Q12873 2000 aaKnown RBP6.04□□□□□ -1.44
SMG6-209ENST00000571442 ARID1AO14497 2285 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 ACANP16112 2415 aa6.04□□□□□ -1.44
SMG6-209ENST00000571442 NF1P21359 2839 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 TMEM129A0AVI4 362 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 TVP23AA6NH52 213 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 G3V2T6 193 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 H3BN98 237 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 OVOL3O00110 214 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 SURF4O15260 269 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 IDH3BO43837 385 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 AHCYL1O43865 530 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 UBL3O95164 117 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 RAB36O95755 333 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 SERPINA5P05154 406 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 CST2P09228 141 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 ANXA8P13928 327 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 ZNF23P17027 643 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 HOXB6P17509 224 aaKnown RBP6.03□□□□□ -1.44
SMG6-209ENST00000571442 NPR2P20594 1047 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 GSTM3P21266 225 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 MSR1P21757 451 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 GRK5P34947 590 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 THBS4P35443 961 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 WNT5AP41221 380 aa6.03□□□□□ -1.44
SMG6-209ENST00000571442 PPP2R2BQ00005 443 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms