RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 HPS6Q86YV9 775 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DCP2Q8IU60 420 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 TRAPPC5Q8IUR0 188 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TRIM48Q8IWZ4 208 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 DEFB107AQ8IZN7 70 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PARP8Q8N3A8 854 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 Q8NA96 180 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 LRRC75AQ8NAA5 344 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SLC38A9Q8NBW4 561 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 INO80EQ8NBZ0 244 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 B3GNT7Q8NFL0 401 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SEMA6DQ8NFY4 1073 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR56A4Q8NGH8 313 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR51G2Q8NGK0 314 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR11L1Q8NGX0 322 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR51A7Q8NH64 312 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RPLP0P6Q8NHW5 317 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZNF420Q8TAQ5 688 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAM110BQ8TC76 370 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 NUDCD2Q8WVJ2 157 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ABTB1Q969K4 478 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 FBXO17Q96EF6 278 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TRMT61AQ96FX7 289 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 MRPL48Q96GC5 212 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAHD2AQ96GK7 314 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SH3YL1Q96HL8 342 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 COX14Q96I36 57 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RNF170Q96K19 258 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 COX4I2Q96KJ9 171 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 VSTM2LQ96N03 204 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 IL17FQ96PD4 163 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR4K3Q96R72 315 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TNFRSF13CQ96RJ3 184 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZNF382Q96SR6 550 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 PFDN5Q99471 154 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 GABRG3Q99928 467 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SPRTNQ9H040 489 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 KLHL31Q9H511 634 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 KIR3DX1Q9H7L2 352 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 UBE2ZQ9H832 354 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 WDR41Q9HAD4 459 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CD320Q9NPF0 282 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 AP5S1Q9NUS5 200 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ACOXLQ9NUZ1 547 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 SPATA6Q9NWH7 488 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 C1orf109Q9NX04 203 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FBXL12Q9NXK8 326 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ARL15Q9NXU5 204 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TREM2Q9NZC2 230 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 CCDC167Q9P0B6 97 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 MYOTQ9UBF9 498 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 P2RX2Q9UBL9 471 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OPTCQ9UBM4 332 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 KIF25Q9UIL4 384 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 KLHL21Q9UJP4 597 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR52A1Q9UKL2 312 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RNF150Q9ULK6 438 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 ZNF490Q9ULM2 529 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 NDRG4Q9ULP0 352 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 MGAT4AQ9UM21 535 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 POMPQ9Y244 141 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TP53TG5Q9Y2B4 290 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 FAM96BQ9Y3D0 163 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 TESMINQ9Y4I5 508 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 OR1A2Q9Y585 309 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 AP4S1Q9Y587 144 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 RANBP2P49792 3224 aaKnown RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 FREM3P0C091 2139 aa3.2□□□□□ -1.9
SMG6-208ENST00000570874 COL27A1Q8IZC6 1860 aaPredicted RBP3.2□□□□□ -1.9
SMG6-208ENST00000570874 A0A087WXM4 84 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NPIPA5A0A0B4J1W7 369 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PPIAL4CA0A0B4J2A2 164 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 LOC100289279A0A1B0GTE1 492 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 A0A1B0GV90 55 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PRD5 423 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PS29 197 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SHISA3A0PJX4 238 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RNF222A6NCQ9 220 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 BBIP1A8MTZ0 92 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 E7ENX8 843 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 E7EQ34 232 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NPIPB6E9PJ23 425 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NPIPA5E9PKD4 350 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 E9PQ18 207 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 H0Y980 276 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MS4A18H0YCH9 400 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 hCG_2039718K7EN88 272 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CCRL2O00421 344 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MANBAO00462 879 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 BHLHE40O14503 412 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC31A1O15431 190 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MAGEB4O15481 346 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 ARPC5O15511 151 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SCO2O43819 266 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 KIAA0513O60268 411 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TRMUO75648 421 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 POP7O75817 140 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 AQP8O94778 261 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C1orf105O95561 183 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms