RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 POM121L2Q96KW2 1035 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 PRSS27Q9BQR3 290 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 LRMDAQ9H2I8 198 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 C1orf198Q9H425 327 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF696Q9H7X3 374 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 SLCO1B3Q9NPD5 702 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 EGFL7Q9UHF1 273 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 PURGQ9UJV8 347 aaKnown RBP10.19□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF229Q9UJW7 825 aa10.19□□□□□ -0.78
CAPN3-220ENST00000569827 PLSCR5A0PG75 271 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 TRAPPC13A5PLN9 417 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 EVPLLA8MZ36 301 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 PIP5K1CO60331 668 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 PTHP01270 115 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 IGHV2-70P01814 119 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 MT-ND5P03915 603 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 HIST1H2ABP04908 130 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 IGHV4-38-2P0DP08 117 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 ACADSP16219 412 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 MDKP21741 143 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-220ENST00000569827 PPIBP23284 216 aaKnown RBP10.18□□□□□ -0.78
CAPN3-220ENST00000569827 PPP1CBP62140 327 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 PSG4Q00888 419 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 CD47Q08722 323 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF154Q13106 437 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 FAM209AQ5JX71 171 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 OTPQ5XKR4 325 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 DOK3Q7L591 496 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 HIST3H2AQ7L7L0 130 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 NKAIN4Q8IVV8 208 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 TMEM255BQ8WV15 326 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 HIST1H2ACQ93077 130 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 THOC1Q96FV9 657 aaKnown RBP10.18□□□□□ -0.78
CAPN3-220ENST00000569827 MRPL13Q9BYD1 178 aaKnown RBP10.18□□□□□ -0.78
CAPN3-220ENST00000569827 C20orf141Q9NUB4 165 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 NKIRAS1Q9NYS0 192 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 NUP50Q9UKX7 468 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 NPTNQ9Y639 398 aa10.18□□□□□ -0.78
CAPN3-220ENST00000569827 A0A1W2PRG6 482 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 FMO6PO60774 539 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 FOXH1O75593 365 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF205O95201 554 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 GATA3P23771 443 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 LAP3P28838 519 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 GDI2P50395 445 aaKnown RBP10.17□□□□□ -0.78
CAPN3-220ENST00000569827 ERFP50548 548 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 ATP4BP51164 291 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 CRYBA2P53672 197 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 TNFAIP6P98066 277 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-220ENST00000569827 MMEL1Q495T6 779 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 RUNDC3AQ59EK9 446 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF774Q6NX45 483 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 LEG1Q6P5S2 330 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 DHDDSQ86SQ9 333 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 IGFN1Q86VF2 1251 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 C11orf65Q8NCR3 313 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF426Q9BUY5 554 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 WNT5BQ9H1J7 359 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 NANOGQ9H9S0 305 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 NTN4Q9HB63 628 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 INIPQ9NRY2 104 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 TNFRSF19Q9NS68 423 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 AUP1Q9Y679 476 aa10.17□□□□□ -0.78
CAPN3-220ENST00000569827 IGHV3-64DA0A0J9YX35 117 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 A0A1W2PPL8 197 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 H7C1C5 153 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 ENTPD5O75356 428 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 OR7A10O76100 309 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 IGHMP01871 453 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 ZNF12P17014 697 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 FUT4P22083 530 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 PCGF2P35227 344 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 MRPL19P49406 292 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 LCN6P62502 163 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 MRPS34P82930 218 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 LAPTM4AQ15012 233 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 ZMYND11Q15326 602 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 TAF11Q15544 211 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 SLC9A3R2Q15599 337 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 TUSC1Q2TAM9 212 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 C10orf128Q5T292 105 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 ARMC4Q5T2S8 1044 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 MBNL2Q5VZF2 373 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 DPPA2Q7Z7J5 298 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 MICU2Q8IYU8 434 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 ITLN1Q8WWA0 313 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 POP5Q969H6 163 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 NMD3Q96D46 503 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 SEPHS2Q99611 448 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 EGLN1Q9GZT9 426 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 KCNN2Q9H2S1 579 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 SIAEQ9HAT2 523 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 TMEM106BQ9NUM4 274 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 PLEK2Q9NYT0 353 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 EIF3KQ9UBQ5 218 aaKnown RBP10.16□□□□□ -0.78
CAPN3-220ENST00000569827 CORO2BQ9UQ03 480 aa10.16□□□□□ -0.78
CAPN3-220ENST00000569827 INSIG2Q9Y5U4 225 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms