RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZNF362Q5T0B9 420 aaPredicted RBP14.06□□□□□ -0.16
USB1-215ENST00000569252 C1QTNF12Q5T7M4 302 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 ALKBH2Q6NS38 261 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 DPPA2Q7Z7J5 298 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 ZBTB46Q86UZ6 589 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 OR6V1Q8N148 313 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 SLC22A24Q8N4F4 322 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 OR6K6Q8NGW6 343 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 TMEM163Q8TC26 289 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 RFKQ969G6 155 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 S100PBPQ96BU1 408 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 ZNF837Q96EG3 531 aaPredicted RBP14.06□□□□□ -0.16
USB1-215ENST00000569252 TSSK2Q96PF2 358 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 NELFAQ9H3P2 528 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 RNF121Q9H920 327 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 MOV10Q9HCE1 1003 aaKnown RBP14.06□□□□□ -0.16
USB1-215ENST00000569252 NGBQ9NPG2 151 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 OBP2BQ9NPH6 170 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 TMEM38BQ9NVV0 291 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 ZNF226Q9NYT6 803 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 NDRG4Q9ULP0 352 aaKnown RBP14.06□□□□□ -0.16
USB1-215ENST00000569252 AMDHD2Q9Y303 409 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 ACANP16112 2415 aa14.06□□□□□ -0.16
USB1-215ENST00000569252 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
USB1-215ENST00000569252 FAM171A2A8MVW0 826 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 PRKYO43930 277 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 CD79AP11912 226 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 CAPGP40121 348 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 KIR2DL3P43628 341 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 FOXG1P55316 489 aaPredicted RBP14.05□□□□□ -0.16
USB1-215ENST00000569252 PCBD1P61457 104 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 MRPS34P82930 218 aaKnown RBP14.05□□□□□ -0.16
USB1-215ENST00000569252 IL5RAQ01344 420 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 IL18R1Q13478 541 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 ETFDHQ16134 617 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 SLC36A2Q495M3 483 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 SLC35D3Q5M8T2 416 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 LCN1P1Q5VSP4 162 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 MEDAGQ5VYS4 303 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 SLC16A14Q7RTX9 510 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 GID4Q8IVV7 300 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 LRRC18Q8N456 261 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 OR9Q1Q8NGQ5 310 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 BCL2L2Q92843 193 aaPredicted RBP14.05□□□□□ -0.16
USB1-215ENST00000569252 PTP4A1Q93096 173 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 NMD3Q96D46 503 aaKnown RBP14.05□□□□□ -0.16
USB1-215ENST00000569252 ADI1Q9BV57 179 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 CCNB1IP1Q9NPC3 277 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 CLN6Q9NWW5 311 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 POLR1DQ9Y2S0 133 aa14.05□□□□□ -0.16
USB1-215ENST00000569252 OR5H1A6NKK0 313 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 C12orf71A8MTZ7 269 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 PRODHO43272 600 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 UBL3O95164 117 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 GYPBP06028 91 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 B4GALT1P15291 398 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 SPI1P17947 270 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 MSR1P21757 451 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 CDAP32320 146 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 PYCR1P32322 319 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 HSF2Q03933 536 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 TFF3Q07654 80 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 PPA1Q15181 289 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 TBRG1Q3YBR2 411 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 HIKESHIQ53FT3 197 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 TMEM53Q6P2H8 277 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 IZUMO2Q6UXV1 221 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 MEX3BQ6ZN04 569 aaKnown RBP14.04□□□□□ -0.16
USB1-215ENST00000569252 ZNF627Q7L945 461 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.04□□□□□ -0.16
USB1-215ENST00000569252 OR51L1Q8NGJ5 315 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 OR52N5Q8NH56 324 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 POM121Q96HA1 1249 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 DDOQ99489 341 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 WACQ9BTA9 647 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 MED20Q9H944 212 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 HINT3Q9NQE9 182 aaKnown RBP14.04□□□□□ -0.16
USB1-215ENST00000569252 SLC17A5Q9NRA2 495 aa14.04□□□□□ -0.16
USB1-215ENST00000569252 INTS1Q8N201 2190 aaKnown RBP14.04□□□□□ -0.16
USB1-215ENST00000569252 IGKV1D-43A0A0B4J1Z2 117 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 SLC22A31A6NKX4 558 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 SEC14L2O76054 403 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 GLCEO94923 617 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 SSTR2P30874 369 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 ATP6V1E1P36543 226 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 ARR3P36575 388 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 AQP4P55087 323 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 SNRPGP62308 76 aaKnown RBP14.03□□□□□ -0.16
USB1-215ENST00000569252 LSM6P62312 80 aaKnown RBP14.03□□□□□ -0.16
USB1-215ENST00000569252 TEKQ02763 1124 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 PLP2Q04941 152 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 APOFQ13790 326 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 FAM27BQ5VT28 67 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 NXNL2Q5VZ03 156 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 C8orf59Q8N0T1 100 aaPredicted RBP14.03□□□□□ -0.16
USB1-215ENST00000569252 OR2AJ1Q8NGZ0 328 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 LINC01560Q8TB33 94 aa14.03□□□□□ -0.16
USB1-215ENST00000569252 ZC3HAV1LQ96H79 300 aaKnown RBP14.03□□□□□ -0.16
USB1-215ENST00000569252 BOD1Q96IK1 185 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms