RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KLHL28Q9NXS3 571 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC2A8Q9NY64 477 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 GHRLQ9UBU3 117 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC23A2Q9UGH3 650 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 STAP1Q9ULZ2 295 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 RPH3ALQ9UNE2 315 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 PSMD13Q9UNM6 376 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 NEU3Q9UQ49 428 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 WIPI2Q9Y4P8 454 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 V9GYY5 206 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 SVILO95425 2214 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 POLQO75417 2590 aa2.7□□□□□ -1.98
HMGB1P6-201ENST00000569046 SPTBN1Q01082 2364 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 PCM1Q15154 2024 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CPAMD8Q8IZJ3 1885 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TRGV8A0A0C4DH27 118 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSPAN11A1L157 253 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR5H15A6NDH6 313 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 GOLGA8TH3BQL2 631 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 WWP2O00308 870 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CCL21O00585 134 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TRAFD1O14545 582 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 IDH3BO43837 385 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SRPX2O60687 465 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 MTRF1O75570 445 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SCRG1O75711 98 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CEACAM4O75871 244 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ECDO95905 644 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 LGI1O95970 557 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SOD1P00441 154 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 OTCP00480 354 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 KRT14P02533 472 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 FHP07954 510 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 HOXC4P09017 264 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CD99P14209 185 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 COX6B1P14854 86 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 POU2F1P14859 743 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 RPL35AP18077 110 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TBXA2RP21731 343 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CMA1P23946 247 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 UCP1P25874 307 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SHC1P29353 583 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 HPCAL1P37235 193 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SOX3P41225 446 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 CDKN1BP46527 198 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 NDST2P52849 883 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ATP1B3P54709 279 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC10A7Q0GE19 358 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 MERTKQ12866 999 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 GANABQ14697 944 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC17A1Q14916 467 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 HAGHQ16775 308 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 KRTAP21-3Q3LHN1 58 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 VWA2Q5GFL6 755 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TCTEX1D4Q5JR98 221 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF658Q5TYW1 1059 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 C1orf189Q5VU69 101 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 NEPROQ6NW34 567 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 LANCL3Q6ZV70 420 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 GPRIN3Q6ZVF9 776 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 NLRP9Q7RTR0 991 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ANKRD37Q7Z713 158 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 DHDDSQ86SQ9 333 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 RANBP3LQ86VV4 465 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 PAQR7Q86WK9 346 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR4N5Q8IXE1 308 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 GPR137CQ8N3F9 429 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TCAIMQ8N3R3 496 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 Q8NBF4 154 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 MFSD9Q8NBP5 474 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ST6GALNAC3Q8NDV1 305 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 MNS1Q8NEH6 495 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SDR9C7Q8NEX9 313 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 BBS1Q8NFJ9 593 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 M1APQ8TC57 530 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM172AQ8WUF8 416 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ITLN2Q8WWU7 325 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TMIGD2Q96BF3 282 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 C10orf35Q96D05 121 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 C11orf24Q96F05 449 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSNARE1Q96NA8 513 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 NKX3-1Q99801 234 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 OVOL2Q9BRP0 275 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ROGDIQ9GZN7 287 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC25A51Q9H1U9 297 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 LIME1Q9H400 295 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 GEMIN7Q9H840 131 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 PDFQ9HBH1 243 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 MRPL22Q9NWU5 206 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC7A8Q9UHI5 535 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 PURGQ9UJV8 347 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 ANAPC7Q9UJX3 599 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 DNAJC12Q9UKB3 198 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 RARRES3Q9UL19 164 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC17A4Q9Y2C5 497 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 C2CD3Q4AC94 2353 aa2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 SNRNP200O75643 2136 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 DIDO1Q9BTC0 2240 aaKnown RBP2.69□□□□□ -1.98
HMGB1P6-201ENST00000569046 NIPBLQ6KC79 2804 aaeCLIP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms