RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 USH1CQ9Y6N9 552 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ZSCAN5BA6NJL1 495 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 A8MXK9 166 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 BLOC1S5-TXNDC5H3BN57 136 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ERLIN1O75477 346 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 IGHV2-70P01814 119 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 PPIAL4GP0DN37 164 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF12P17014 697 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 TNFRSF1AP19438 455 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ARHGDIAP52565 204 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 DEFA6Q01524 100 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 PAGE3Q5JUK9 113 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 PATL1Q86TB9 770 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 FNDC8Q8TC99 324 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 RASSF5Q8WWW0 418 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 ASB10Q8WXI3 467 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 OR2J1Q9GZK6 312 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 IKZF5Q9H5V7 419 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 PATZ1Q9HBE1 687 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 SLC7A7Q9UM01 511 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 INSIG2Q9Y5U4 225 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 PKD1L1Q8TDX9 2849 aa13.31□□□□□ -0.28
HERPUD1-215ENST00000568676 M0QX08 132 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 TRMUO75648 421 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 LYPD3O95274 346 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF32P17041 273 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 CD247P20963 164 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 TNFSF4P23510 183 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 MPV17P39210 176 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 WNT5AP41221 380 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 RBM34P42696 430 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 MTNR1AP48039 350 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 SLC6A9P48067 706 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 UGT2B15P54855 530 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 PCBD1P61457 104 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 PPP1CBP62140 327 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 TNFAIP6P98066 277 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 RPL18Q07020 188 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 TAF11Q15544 211 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 FAM27BQ5VT28 67 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 SAMD8Q96LT4 415 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 INIPQ9NRY2 104 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 TMEM106BQ9NUM4 274 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF69Q9UC07 566 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
HERPUD1-215ENST00000568676 LOC100509620A0A075B734 347 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 A0A1B0GUS0 222 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 KPNA4O00629 521 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MT-ND1P03886 318 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 THY1P04216 161 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 SBK2P0C263 348 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 GUCA1AP43080 201 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 PSG4Q00888 419 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 CYP51A1Q16850 503 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 RUNDC3AQ59EK9 446 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 SPATA46Q5T0L3 261 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 INTS11Q5TA45 600 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 C9orf139Q6ZV77 190 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF283Q8N7M2 679 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 NPEPL1Q8NDH3 523 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 GPR32P1Q8NGA4 272 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 ABHD4Q8TB40 342 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 LIPHQ8WWY8 451 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 NABP1Q96AH0 204 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 C7orf26Q96N11 449 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 CPPED1Q9BRF8 314 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 WACQ9BTA9 647 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 POLR2J2Q9GZM3 115 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MS4A7Q9GZW8 240 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 POLR2J3Q9H1A7 115 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MAN2C1Q9NTJ4 1040 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 OR5V1Q9UGF6 321 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 MMP24Q9Y5R2 645 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 TANC2Q9HCD6 1990 aa13.29□□□□□ -0.28
HERPUD1-215ENST00000568676 A0A0G2JK05 382 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 TRAPPC2LH3BP13 241 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 IFNL4K9M1U5 179 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 SURF4O15260 269 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 F13BP05160 661 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 CST2P09228 141 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 TSPAN19P0C672 248 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 FUT1P19526 365 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 GSTM3P21266 225 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 BTG1P62324 171 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 CDK5R2Q13319 367 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 KLF17Q5JT82 389 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms