RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 J3QLI3 93 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 PIP5K1CO60331 668 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 OR7A10O76100 309 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 UBOX5O94941 541 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 FSHBP01225 129 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 MT-ND1P03886 318 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 LIMS1P48059 325 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.3
NME3-211ENST00000568561 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
NME3-211ENST00000568561 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
NME3-211ENST00000568561 CD47Q08722 323 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 ZNF718Q3SXZ3 478 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 BEND6Q5SZJ8 279 aaPredicted RBP13.15□□□□□ -0.3
NME3-211ENST00000568561 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 DPP10Q8N608 796 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 SGMS2Q8NHU3 365 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 ABHD4Q8TB40 342 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 NMD3Q96D46 503 aaKnown RBP13.15□□□□□ -0.3
NME3-211ENST00000568561 SGTBQ96EQ0 304 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 KCNN2Q9H2S1 579 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.3
NME3-211ENST00000568561 NGFP01138 241 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
NME3-211ENST00000568561 GDI2P50395 445 aaKnown RBP13.14□□□□□ -0.31
NME3-211ENST00000568561 GZMMP51124 257 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
NME3-211ENST00000568561 TAS2R41P59536 307 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 PSG4Q00888 419 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 MOGQ16653 247 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 VMACQ2NL98 169 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 FAM209AQ5JX71 171 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
NME3-211ENST00000568561 WNT5BQ9H1J7 359 aa13.14□□□□□ -0.31
NME3-211ENST00000568561 TGP01266 2768 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 LAP3P28838 519 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 PPP1CBP62140 327 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 PIN1Q13526 163 aaPredicted RBP13.13□□□□□ -0.31
NME3-211ENST00000568561 LAPTM4AQ15012 233 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 RABL3Q5HYI8 236 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 INTS11Q5TA45 600 aaKnown RBP13.13□□□□□ -0.31
NME3-211ENST00000568561 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 ZNF774Q6NX45 483 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 IGFN1Q86VF2 1251 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 SLC30A8Q8IWU4 369 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 SIGLECL1Q8N7X8 197 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 DYDC1Q8WWB3 177 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 DCLRE1CQ96SD1 692 aaKnown RBP13.13□□□□□ -0.31
NME3-211ENST00000568561 OR2H1Q9GZK4 316 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
NME3-211ENST00000568561 RIMS3Q9UJD0 308 aa13.13□□□□□ -0.31
NME3-211ENST00000568561 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 OR1E2P47887 323 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 SEC61A1P61619 476 aaKnown RBP13.12□□□□□ -0.31
NME3-211ENST00000568561 TTMPQ5BVD1 217 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 MBNL2Q5VZF2 373 aaKnown RBP13.12□□□□□ -0.31
NME3-211ENST00000568561 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 ST7LQ8TDW4 575 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
NME3-211ENST00000568561 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 POFUT1Q9H488 388 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
NME3-211ENST00000568561 DDX28Q9NUL7 540 aaKnown RBP13.12□□□□□ -0.31
NME3-211ENST00000568561 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
NME3-211ENST00000568561 A0A1W2PPL8 197 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 FBP2O00757 339 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 OR5F1O95221 314 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 SBK2P0C263 348 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 FUT4P22083 530 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 GATA3P23771 443 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 RBM34P42696 430 aaKnown RBP13.11□□□□□ -0.31
NME3-211ENST00000568561 TAF11Q15544 211 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 MICU2Q8IYU8 434 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 BCL6BQ8N143 479 aaPredicted RBP13.11□□□□□ -0.31
NME3-211ENST00000568561 RASSF5Q8WWW0 418 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 TXNIPQ9H3M7 391 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 ZNF69Q9UC07 566 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 NPTNQ9Y639 398 aa13.11□□□□□ -0.31
NME3-211ENST00000568561 DNAJC9-AS1A6NH13 148 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 H7C1C5 153 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 TMPRSS2O15393 492 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 TIMM8AO60220 97 aaPredicted RBP13.1□□□□□ -0.31
NME3-211ENST00000568561 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 ADH4P08319 380 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 TSPAN19P0C672 248 aa13.1□□□□□ -0.31
NME3-211ENST00000568561 FPR2P25090 351 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms