RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	GABARAP	O95166	117 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	GABRA1	P14867	456 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	CPE	P16870	476 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	LIPA	P38571	399 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	TPBG	Q13641	420 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	KCNMB1	Q16558	191 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	TST	Q16762	297 aa	Known RBP	13.63	□□□□□ -0.23
CSK-211	ENST00000568329	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.63	□□□□□ -0.23
CSK-211	ENST00000568329	C4orf36	Q96KX1	117 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	CDADC1	Q9BWV3	514 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329	NDUFB11	Q9NX14	153 aa		13.63	□□□□□ -0.23
CSK-211	ENST00000568329		A0A1W2PPL8	197 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	KRT8	P05787	483 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	SPARC	P09486	303 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	PSMA1	P25786	263 aa	Known RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	TGFBR2	P37173	567 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	GBX2	P52951	348 aa	Predicted RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	LSM6	P62312	80 aa	Known RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ITPR1	Q14643	2758 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	CCDC58	Q4VC31	144 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	PRR30	Q53SZ7	412 aa	Predicted RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	FOXL2NB	Q6ZUU3	175 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	VASH1	Q7L8A9	365 aa	Predicted RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	CPT1C	Q8TCG5	803 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	WNT2B	Q93097	391 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	SLCO5A1	Q9H2Y9	848 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	NELFA	Q9H3P2	528 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	CALHM2	Q9HA72	323 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ASF1B	Q9NVP2	202 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	COPS3	Q9UNS2	423 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	FIGNL2	A6NMB9	653 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329		J3QLW9	94 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ZNHIT1	O43257	154 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	WDR1	O75083	606 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF19	P17023	458 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	CD53	P19397	219 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	NPR2	P20594	1047 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	MSR1	P21757	451 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	HCCS	P53701	268 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	NRN1L	Q496H8	165 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	OR2A2	Q6IF42	318 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	GDPGP1	Q6ZNW5	385 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	RHOU	Q7L0Q8	258 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	SSX6	Q7RTT6	188 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	KLB	Q86Z14	1044 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	TUSC5	Q8IXB3	177 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	PHC2	Q8IXK0	858 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ALDH16A1	Q8IZ83	802 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	THEM6	Q8WUY1	208 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	C11orf40	Q8WZ69	217 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	APH1A	Q96BI3	265 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	ISG20L2	Q9H9L3	353 aa	Known RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	SEC61A2	Q9H9S3	476 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	POLE4	Q9NR33	117 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	POLR1D	Q9Y2S0	133 aa		13.62	□□□□□ -0.23
CSK-211	ENST00000568329	TLN1	Q9Y490	2541 aa	Known RBP	13.62	□□□□□ -0.23
CSK-211	ENST00000568329	USP24	Q9UPU5	2620 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	METTL15	A6NJ78	407 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	CD8B2	A6NJW9	211 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	SS18L1	O75177	396 aa	Predicted RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	KRT33A	O76009	404 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	GPANK1	O95872	356 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	HOXD4	P09016	255 aa	Predicted RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	OR12D2	P58182	307 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	MRPS34	P82930	218 aa	Known RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	ROM1	Q03395	351 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF684	Q5T5D7	378 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	DEGS2	Q6QHC5	323 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	OR5M9	Q8NGP3	310 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	OR52N5	Q8NH56	324 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	SMAP2	Q8WU79	429 aa	Predicted RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF775	Q96BV0	537 aa	Predicted RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	TRIB1	Q96RU8	372 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	TM9SF2	Q99805	663 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	COQ7	Q99807	217 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	RBM24	Q9BX46	236 aa	Known RBP	13.61	□□□□□ -0.23
CSK-211	ENST00000568329	MRO	Q9BYG7	248 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	CYB5R1	Q9UHQ9	305 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	GNG8	Q9UK08	70 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	UGT2A1	Q9Y4X1	527 aa		13.61	□□□□□ -0.23
CSK-211	ENST00000568329	TTLL8	A6PVC2	850 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	SLC22A1	O15245	554 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	AIRE	O43918	545 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF254	O75437	659 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	TGM6	O95932	706 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	AGTR1	P30556	359 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	GABRA5	P31644	462 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	NTF4	P34130	210 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	CD79B	P40259	229 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	TGM4	P49221	684 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	EIF2B1	Q14232	305 aa	Known RBP	13.6	□□□□□ -0.23
CSK-211	ENST00000568329	TRAM1	Q15629	374 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	SSX1	Q16384	188 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	MEP1B	Q16820	701 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ACSF3	Q4G176	576 aa	Predicted RBP	13.6	□□□□□ -0.23
CSK-211	ENST00000568329	TP53I3	Q53FA7	332 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	LIPK	Q5VXJ0	399 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	NSUN5P2	Q63ZY6	315 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms