RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 BAIAP2L2Q6UXY1 529 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 LRRTM1Q86UE6 522 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 GPAT4Q86UL3 456 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 ZNF101Q8IZC7 436 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 TMEM185AQ8NFB2 350 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 MTIF3Q9H2K0 278 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 PPA2Q9H2U2 334 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 ELL3Q9HB65 397 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 ICAM5Q9UMF0 924 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 SDK2Q58EX2 2172 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 KIF26BQ2KJY2 2108 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 TMEM150CB9EJG8 249 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 GSTZ1O43708 216 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 RAB40ALP0C0E4 278 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 CD53P19397 219 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 CD34P28906 385 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 RPL35P42766 123 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 CXADRP78310 365 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 TDGQ13569 410 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 OLFML2AQ68BL7 652 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 OR13C9Q8NGT0 318 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 RAB40AQ8WXH6 277 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 ZNF587Q96SQ5 575 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 UBQLN4Q9NRR5 601 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 EPHA6Q9UF33 1036 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 CD207Q9UJ71 328 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
HDGFL3-206ENST00000568294 A6NCN8 305 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 OR2AT4A6NND4 320 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 TOR1AO14656 332 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 HTR3BO95264 441 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 GABRG2P18507 467 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 CD1CP29017 333 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 DLSTP36957 453 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 EIF2B5Q13144 721 aaKnown RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 SHHQ15465 462 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 LANCL3Q6ZV70 420 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 COX15Q7KZN9 410 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 C12orf45Q8N5I9 185 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 OR1J4Q8NGS1 313 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ADAMTS18Q8TE60 1221 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC41A2Q96JW4 573 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 C4orf45Q96LM5 186 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF426Q9BUY5 554 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 APMAPQ9HDC9 416 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 NPDC1Q9NQX5 325 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 MSRAQ9UJ68 235 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 MKL2Q9ULH7 1088 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 FRYLO94915 3013 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ABCA7Q8IZY2 2146 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 NAP1L6A6NFF2 107 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 EFCAB7A8K855 629 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF736B4DX44 427 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 PMP2P02689 132 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 CD2P06729 351 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 OR4E1P0C645 316 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 GNB3P16520 340 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 NAT1P18440 290 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ALOX5APP20292 161 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 GPR3P46089 330 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC9A3R2Q15599 337 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 RAB12Q6IQ22 244 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 DCXRQ7Z4W1 244 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 TEX19Q8NA77 164 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 SP7Q8TDD2 431 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ELSPBP1Q96BH3 223 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 PARP12Q9H0J9 701 aaKnown RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 SLC39A1Q9NY26 324 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 FAM186AA6NE01 2351 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 A0A1B0GV50 99 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 FAM74A7A6NL05 159 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 H7C417 338 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 XRCC3O43542 346 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF823P16415 610 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 HTR2CP28335 458 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ATP1B3P54709 279 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 EPHA4P54764 986 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 POU3F1Q03052 451 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 NR0B2Q15466 257 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 CSRP2Q16527 193 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 FAM74A3Q4VXF1 159 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 NHLRC3Q5JS37 347 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 C1orf53Q5VUE5 145 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ZCCHC12Q6PEW1 402 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ATG4DQ86TL0 474 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 TMEM200AQ86VY9 491 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ZNF584Q8IVC4 421 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 PAQR8Q8TEZ7 354 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 ROBO4Q8WZ75 1007 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 FGGYQ96C11 551 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 VRK1Q99986 396 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 DPYSL5Q9BPU6 564 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 BANF2Q9H503 90 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 MTFP1Q9UDX5 166 aa8.08□□□□□ -1.12
HDGFL3-206ENST00000568294 MRPS18BQ9Y676 258 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms