RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 RRM2P31350 389 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 CDAP32320 146 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 IFNGR2P38484 337 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 CDKN2AP42771 156 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 CAPZA2P47755 286 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 UCP2P55851 309 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 PCBD1P61457 104 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 LSM6P62312 80 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 SNRPD2P62316 118 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 PSG4Q00888 419 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 LOXL1Q08397 574 aaPredicted RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 CD47Q08722 323 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 SNTB2Q13425 540 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 FGD3Q5JSP0 725 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 ZNF362Q5T0B9 420 aaPredicted RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 PGBD2Q6P3X8 592 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 SMARCD3Q6STE5 483 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 CD300LDQ6UXZ3 194 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 PTCHD4Q6ZW05 846 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 ADCK1Q86TW2 530 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 ZBTB46Q86UZ6 589 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 PAQR4Q8N4S7 273 aaPredicted RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 SLC30A7Q8NEW0 376 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 OR52J3Q8NH60 311 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 BCAS4Q8TDM0 211 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 GNPDA2Q8TDQ7 276 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 C10orf105Q8TEF2 133 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 NEU4Q8WWR8 484 aaPredicted RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 ZNF416Q9BWM5 594 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 MRPL37Q9BZE1 423 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 NDEL1Q9GZM8 345 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 POLE4Q9NR33 117 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 AURKCQ9UQB9 309 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 TIMM10BQ9Y5J6 103 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 NF1P21359 2839 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 DOCK11Q5JSL3 2073 aa7.04□□□□□ -1.28
HDGFL3-205ENST00000568129 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 IGHV4-30-2A0A087WSY4 118 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 IQCMA0A1B0GVH7 501 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 AQP12BA6NM10 295 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 H3BSA7 217 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 SYNGR3O43761 229 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 SSX4O60224 188 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 GPRIN2O60269 458 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 UBOX5O94941 541 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 SLC25A16P16260 332 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 CTLA4P16410 223 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 MSR1P21757 451 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 TUBG1P23258 451 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 STOMP27105 288 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 LAP3P28838 519 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RAD52P43351 418 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RPS6KA3P51812 740 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 NUDT6P53370 316 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RPS23P62266 143 aaKnown RBP7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 HIST1H3AP68431 136 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 MXRA7P84157 204 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 SPIBQ01892 262 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 PLP2Q04941 152 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 BNIP1Q12981 228 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 TOP3AQ13472 1001 aaPredicted RBP7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 MICAQ29983 383 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 PABPC1L2AQ5JQF8 200 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 HIST2H3PS2Q5TEC6 136 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 KRT80Q6KB66 452 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RPL13AP3Q6NVV1 102 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 CLEC9AQ6UXN8 241 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 ZNF620Q6ZNG0 422 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 HIST2H3AQ71DI3 136 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 AQP12AQ8IXF9 295 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 LRRC18Q8N456 261 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 PAPD5Q8NDF8 572 aaKnown RBP7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 NSMAFQ92636 917 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 HTRA1Q92743 480 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 POM121Q96HA1 1249 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 ZNF570Q96NI8 536 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RHNO1Q9BSD3 238 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 BTBD10Q9BSF8 475 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 DGCR6LQ9BY27 220 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 BCL2L14Q9BZR8 327 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 OR2H1Q9GZK4 316 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 RAB1BQ9H0U4 201 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 WNT5BQ9H1J7 359 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 LRMDAQ9H2I8 198 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 KCNN2Q9H2S1 579 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 OR52D1Q9H346 318 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 TUBG2Q9NRH3 451 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 KLHL21Q9UJP4 597 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 IER3IP1Q9Y5U9 82 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 ABCA2Q9BZC7 2435 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 DYSFO75923 2080 aa7.03□□□□□ -1.28
HDGFL3-205ENST00000568129 IGLV1-36A0A0B4J1U3 117 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 LOC390937A0A1W2PQ73 354 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 ARRDC5A6NEK1 342 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 C12orf71A8MTZ7 269 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
HDGFL3-205ENST00000568129 TNFRSF11BO00300 401 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms