RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 WBP1Q96G27 269 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 OR8B4Q96RC9 309 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 CDK2AP1O14519 115 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 WNT11O96014 354 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 IGF2P01344 180 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 AMY2AP04746 511 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 CSF2RBP32927 897 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 SCAND1P57086 179 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 CCINQ13939 588 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 EIF2B1Q14232 305 aaKnown RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 KDM8Q8N371 416 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 STK35Q8TDR2 534 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 LRRC61Q9BV99 259 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 NKX2-4Q9H2Z4 354 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 EXOSC3Q9NQT5 275 aaKnown RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 TAS2R4Q9NYW5 299 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 TMEM150CB9EJG8 249 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 B3GALNT1O75752 331 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 SNAPC5O75971 98 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 CD2P06729 351 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 LIPCP11150 499 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 FNTBP49356 437 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 NR0B1P51843 470 aaKnown RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 ACTBP60709 375 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 ACTG1P63261 375 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 LRRC37A5PQ49AS3 106 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 GLT8D1Q68CQ7 371 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 TMEM225Q6GV28 225 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 OR10K2Q6IF99 312 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 PDZD9Q8IXQ8 264 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 CLEC1AQ8NC01 280 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 RELL2Q8NC24 303 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 TINAGL1Q9GZM7 467 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 ZC4H2Q9NQZ6 224 aa12.84□□□□□ -0.35
CDH1-209ENST00000566510 ZNF230Q9UIE0 474 aaPredicted RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 MRTO4Q9UKD2 239 aaKnown RBP12.84□□□□□ -0.35
CDH1-209ENST00000566510 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 PRSS37A4D1T9 235 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 MPZL1O95297 269 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 OR4E1P0C645 316 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 HTR2CP28335 458 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 HLA-DQA1Q5Y7H0 255 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 KLHDC7BQ96G42 594 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 SLC25A44Q96H78 314 aaPredicted RBP12.83□□□□□ -0.36
CDH1-209ENST00000566510 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 ADAM19Q9H013 955 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 PLCL2Q9UPR0 1127 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 TRAV36DV7A0A075B6V5 113 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 CTLA4P16410 223 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 CAPZBP47756 277 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 BLKP51451 505 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
CDH1-209ENST00000566510 TAS2R19P59542 299 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
CDH1-209ENST00000566510 C17orf107Q6ZR85 190 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 ZNF546Q86UE3 836 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 GALNT16Q8N428 558 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 ST8SIA4Q92187 359 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 SEH1LQ96EE3 360 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 DMRTA2Q96SC8 542 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 POTEKPQ9BYX7 375 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 UPB1Q9UBR1 384 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 CD207Q9UJ71 328 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 TMEM131Q92545 1883 aa12.83□□□□□ -0.36
CDH1-209ENST00000566510 CYB5AP00167 134 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 BGLAPP02818 100 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 RLN2P04090 185 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 GP1BBP13224 206 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 SLC6A8P48029 635 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 RPL27P61353 136 aaKnown RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 SHHQ15465 462 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 NKPD1Q17RQ9 610 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 B3GNTL1Q67FW5 361 aaPredicted RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 STPG2Q8N412 459 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 C12orf45Q8N5I9 185 aaPredicted RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 OR51A2Q8NGJ7 313 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms