RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZER1Q7Z7L7 766 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 SYT9Q86SS6 491 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 SVOPLQ8N434 492 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 ZNF525Q8N782 197 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 OR10H5Q8NGA6 315 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 SORCS2Q96PQ0 1159 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 DOK1Q99704 481 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 BCL2L14Q9BZR8 327 aa17.13■□□□□ 0.33
CMTM3-211ENST00000565922 TCRBV5S2A0A599 114 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 C12orf71A8MTZ7 269 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 H7C1C5 153 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 NDUFS8O00217 210 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 LY6G6DO95868 133 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 TXNDC12O95881 172 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 LAP3P28838 519 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 PCSK6P29122 969 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 RAD52P43351 418 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 SELENOVP59797 346 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 LCN6P62502 163 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 PABPC1L2AQ5JQF8 200 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 RGS7BPQ6MZT1 257 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-211ENST00000565922 RPL13AP3Q6NVV1 102 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 C1orf94Q6P1W5 598 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 DNM1P34Q6PK57 102 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 THSD4Q6ZMP0 1018 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 NEU4Q8WWR8 484 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-211ENST00000565922 RASD2Q96D21 266 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 OR52D1Q9H346 318 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 TIMM10BQ9Y5J6 103 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 IER3IP1Q9Y5U9 82 aa17.12■□□□□ 0.33
CMTM3-211ENST00000565922 M0R233 179 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 SOCS2O14508 198 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 IMPA2O14732 288 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 SYNGR3O43761 229 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 GPRIN2O60269 458 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 HOXB6P17509 224 aaKnown RBP17.11■□□□□ 0.33
CMTM3-211ENST00000565922 STOMP27105 288 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 PDLIM4P50479 330 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 HMGA2P52926 109 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 TRAP1Q12931 704 aaKnown RBP17.11■□□□□ 0.33
CMTM3-211ENST00000565922 TSPAN31Q12999 210 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 RFX4Q33E94 735 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 C1orf174Q8IYL3 243 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 CCDC124Q96CT7 223 aaKnown RBP17.11■□□□□ 0.33
CMTM3-211ENST00000565922 THTPAQ9BU02 230 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 MRPL37Q9BZE1 423 aaKnown RBP17.11■□□□□ 0.33
CMTM3-211ENST00000565922 MS4A5Q9H3V2 200 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 POLE4Q9NR33 117 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 VSX1Q9NZR4 365 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-211ENST00000565922 IL20RAQ9UHF4 553 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 GPR160Q9UJ42 338 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
CMTM3-211ENST00000565922 IGHV4-30-2A0A087WSY4 118 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 TMEM129A0AVI4 362 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 ARPC3O15145 178 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 GYG2O15488 501 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 KHDRBS3O75525 346 aaKnown RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 CRABP1P29762 137 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 GSSP48637 474 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 GDI2P50395 445 aaKnown RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 FXYD6P3P58550 94 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 MS4A2Q01362 244 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 SCRN3Q0VDG4 424 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 C10orf105Q8TEF2 133 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 ERMAPQ96PL5 475 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 SNX18Q96RF0 628 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 GPA33Q99795 319 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 PIMREGQ9BSJ6 248 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 OR2H1Q9GZK4 316 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 SYT4Q9H2B2 425 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 REEP1Q9H902 201 aa17.1■□□□□ 0.33
CMTM3-211ENST00000565922 EIF3KQ9UBQ5 218 aaKnown RBP17.1■□□□□ 0.33
CMTM3-211ENST00000565922 YLPM1P49750 1951 aaKnown RBP17.09■□□□□ 0.33
CMTM3-211ENST00000565922 IDH3BO43837 385 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 UBOX5O94941 541 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 PPP1R3DO95685 299 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 LCKP06239 509 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 FAM157BP0CG42 384 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 RAP2AP10114 183 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 CCL2P13500 99 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 NOS3P29474 1203 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 UCP2P55851 309 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 PSG4Q00888 419 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 GK3PQ14409 553 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 PGM2L1Q6PCE3 622 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 ZNF620Q6ZNG0 422 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 JAZF1Q86VZ6 243 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 GLB1L2Q8IW92 636 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 OR52L1Q8NGH7 329 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 C11orf40Q8WZ69 217 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 ZNF416Q9BWM5 594 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 NDRG4Q9ULP0 352 aaKnown RBP17.09■□□□□ 0.33
CMTM3-211ENST00000565922 RTTNQ86VV8 2226 aa17.09■□□□□ 0.33
CMTM3-211ENST00000565922 A0A1W2PPW3 197 aa17.08■□□□□ 0.32
CMTM3-211ENST00000565922 LOC390937A0A1W2PQ73 354 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms