RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 FHL1Q13642 323 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF345Q14585 488 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF776Q68DI1 518 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 DNM1P46Q6ZS02 220 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 SYS1Q8N2H4 156 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PAQR4Q8N4S7 273 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PHYHIPLQ96FC7 376 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 AKR1E2Q96JD6 320 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 HAO2Q9NYQ3 351 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PRR13Q9NZ81 148 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 FRRS1LQ9P0K9 344 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 TDRD6O60522 2096 aaKnown RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 FRYLO94915 3013 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 MSGN1A6NI15 193 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ST8SIA5O15466 376 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF208O43345 1280 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 HEXAP06865 529 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 SNRNP70P08621 437 aaKnown RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 FAM157CP0CG43 387 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 NTSR1P30989 418 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 EEF1A1P68104 462 aaKnown RBP14.74□□□□□ -0.05
LINC00554-201ENST00000564841 TSC22D1Q15714 1073 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 TMEM64Q6YI46 380 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF627Q7L945 461 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 SKA3Q8IX90 412 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 RAB7BQ96AH8 199 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 GGACTQ9BVM4 153 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ACTRT3Q9BYD9 372 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ATG5Q9H1Y0 275 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 PIAS3Q9Y6X2 628 aa14.74□□□□□ -0.05
LINC00554-201ENST00000564841 ARHGEF17Q96PE2 2063 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 YIF1AO95070 293 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CD74P04233 296 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 ITGA5P08648 1049 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 C5AR1P21730 350 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 NME2P22392 152 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CTHP32929 405 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 PLAURQ03405 335 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 PON3Q15166 354 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 OR10K2Q6IF99 312 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 RANBP3LQ86VV4 465 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 SAMD14Q8IZD0 417 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 ELSPBP1Q96BH3 223 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 C1orf198Q9H425 327 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 PHPT1Q9NRX4 125 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 OBP2AQ9NY56 170 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 ICAM5Q9UMF0 924 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 GPR34Q9UPC5 381 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 TNRC18O15417 2968 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 WDFY4Q6ZS81 3184 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 GXYLT2A0PJZ3 443 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 WNT11O96014 354 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 POU2F2P09086 479 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 NME1P15531 152 aaKnown RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 PJVKQ0ZLH3 352 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 PPP1R1AQ13522 171 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF542PQ5EBM4 170 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 MFSD12Q6NUT3 480 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 UNQ6494/PRO21346Q6UXR6 183 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CCL4L1Q8NHW4 92 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 DCUN1D4Q92564 292 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 TSACCQ96A04 125 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 TMEM106AQ96A25 262 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CDCA3Q99618 268 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 SLC6A7Q99884 636 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CST11Q9H112 138 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 DPEP2Q9H4A9 486 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 MTHFD2LQ9H903 347 aaPredicted RBP14.73□□□□□ -0.05
LINC00554-201ENST00000564841 VSIG4Q9Y279 399 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 TMED7Q9Y3B3 224 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 CSAG2Q9Y5P2 127 aa14.73□□□□□ -0.05
LINC00554-201ENST00000564841 ARG1P05089 322 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 VAMP1P23763 118 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 PSMD4P55036 377 aaKnown RBP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 REEP5Q00765 189 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 EIF2B1Q14232 305 aaKnown RBP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 Q3ZCU0 254 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 SLC22A6Q4U2R8 563 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 TMPRSS11FQ6ZWK6 438 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF765Q7L2R6 523 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ZAR1Q86SH2 424 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 BAP18Q8IXM2 172 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 OR13C8Q8NGS7 320 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 OR2A1Q8NGT9 310 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 PPP1R14AQ96A00 147 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 FITM1A5D6W6 292 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 DOK2O60496 412 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 SERPINA5P05154 406 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 HIST1H1TP22492 207 aaPredicted RBP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 SKP1P63208 163 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ILF3Q12906 894 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ALKBH1Q13686 389 aaKnown RBP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF124Q15973 351 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 C2orf76Q3KRA6 126 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 TRMT12Q53H54 448 aaKnown RBP14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ANKRD16Q6P6B7 361 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 COX14Q96I36 57 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 SDF2Q99470 211 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms