RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TFAP2EQ6VUC0 442 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 NAXEQ8NCW5 288 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF540Q8NDQ6 660 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 OR10H5Q8NGA6 315 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 IPCEF1Q8WWN9 437 aaPredicted RBP14.92□□□□□ -0.02
CMTM3-208ENST00000564247 ZMYND19Q96E35 227 aaPredicted RBP14.92□□□□□ -0.02
CMTM3-208ENST00000564247 PCDHGB1Q9Y5G3 927 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 ABCA12Q86UK0 2595 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 IGKV1D-43A0A0B4J1Z2 117 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 PTGES3LE9PB15 166 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 DVL2O14641 736 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 XPNPEP2O43895 674 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 TMCC2O75069 709 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 DBTP11182 482 aaKnown RBP14.91□□□□□ -0.02
CMTM3-208ENST00000564247 PRF1P14222 555 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF823P16415 610 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 NPR2P20594 1047 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 EEF1B2P24534 225 aaKnown RBP14.91□□□□□ -0.02
CMTM3-208ENST00000564247 HSF2Q03933 536 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF91Q05481 1191 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 RAB40BQ12829 278 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 SGCAQ16586 387 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 LINC01590Q5TEZ4 76 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 BEND4Q6ZU67 534 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF610Q8N9Z0 462 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF511Q8NB15 262 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ZNRF4Q8WWF5 429 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 GGHQ92820 318 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 MYDGFQ969H8 173 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 ALKBH3Q96Q83 286 aaPredicted RBP14.91□□□□□ -0.02
CMTM3-208ENST00000564247 CNOT2Q9NZN8 540 aaKnown RBP14.91□□□□□ -0.02
CMTM3-208ENST00000564247 MALT1Q9UDY8 824 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 PSORS1C1Q9UIG5 152 aa14.91□□□□□ -0.02
CMTM3-208ENST00000564247 TACC2O95359 2948 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 TVP23AA6NH52 213 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 MSTNO14793 375 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 TNFAIP8O95379 198 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 FADS2O95864 444 aaKnown RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 CGAP01215 116 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 HRGP04196 525 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 IGFBP2P18065 325 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 CRHBPP24387 322 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 EDNRAP25101 427 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 MPGP29372 298 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 SH3BGRP55822 239 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 TGFBR3Q03167 851 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 DBPQ10586 325 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 GGTLC2Q14390 218 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 SLC25A35Q3KQZ1 300 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 B3GLCTQ6Y288 498 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 Q6ZT83 130 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 LIX1LQ8IVB5 337 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 STX19Q8N4C7 294 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 OR51G2Q8NGK0 314 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 FOXN4Q96NZ1 517 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 INTS14Q96SY0 518 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 CNN2Q99439 309 aaKnown RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 CDADC1Q9BWV3 514 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 OPN3Q9H1Y3 402 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 KCNN2Q9H2S1 579 aa14.9□□□□□ -0.02
CMTM3-208ENST00000564247 NPDC1Q9NQX5 325 aaPredicted RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 MRPS18AQ9NVS2 196 aaKnown RBP14.9□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF99A8MXY4 864 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 FARS2O95363 451 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 SBK2P0C263 348 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 PIPP12273 146 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 BMP5P22003 454 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 CDAP32320 146 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 MRPS34P82930 218 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 ARF1P84077 181 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 MEX3BQ6ZN04 569 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 LINGO2Q7L985 606 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 SLC16A9Q7RTY1 509 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 ERI1Q8IV48 349 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 SLC26A10Q8NG04 563 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 LGALS12Q96DT0 336 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF837Q96EG3 531 aaPredicted RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 TMEM80Q96HE8 168 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 FOXB1Q99853 325 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 COPS4Q9BT78 406 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 NELFAQ9H3P2 528 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 SIAEQ9HAT2 523 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 CCNB1IP1Q9NPC3 277 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 EXOGQ9Y2C4 368 aaKnown RBP14.89□□□□□ -0.03
CMTM3-208ENST00000564247 UGT2A1Q9Y4X1 527 aa14.89□□□□□ -0.03
CMTM3-208ENST00000564247 CIB4A0PJX0 185 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ZNF593O00488 134 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 GPANK1O95872 356 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 MRPL3P09001 348 aaKnown RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 OR8G3PP0DMU2 310 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 MSR1P21757 451 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 DCKP27707 260 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 SLC15A1P46059 708 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ENTPD1P49961 510 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 GABARAPL2P60520 117 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 LSM6P62312 80 aaKnown RBP14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ADAM8P78325 824 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 ST3GAL4Q11206 333 aa14.88□□□□□ -0.03
CMTM3-208ENST00000564247 P2RY6Q15077 328 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms