RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 BCL2L14Q9BZR8 327 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 HINT3Q9NQE9 182 aaKnown RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 A0A087WUU8 490 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 HTR3EA5X5Y0 456 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 PPIHO43447 177 aaKnown RBP15.13■□□□□ 0.01
NME3-205ENST00000563854 CDC14BO60729 498 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 IGHMP01871 453 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 ACHEP22303 614 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 LAP3P28838 519 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 SLC9A3P48764 834 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 GDI2P50395 445 aaKnown RBP15.13■□□□□ 0.01
NME3-205ENST00000563854 CCL8P80075 99 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 THEM4Q5T1C6 240 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 FAM205BPQ63HN1 556 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 MBOAT2Q6ZWT7 520 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 LINC01356Q8N9X3 169 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 LRRC75AQ8NAA5 344 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 TMEM158Q8WZ71 300 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 GTF3AQ92664 365 aaKnown RBP15.13■□□□□ 0.01
NME3-205ENST00000563854 HPS1Q92902 700 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
NME3-205ENST00000563854 EIF3KQ9UBQ5 218 aaKnown RBP15.13■□□□□ 0.01
NME3-205ENST00000563854 EGFL7Q9UHF1 273 aa15.13■□□□□ 0.01
NME3-205ENST00000563854 COL6A5A8TX70 2615 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 A6NIZ1 184 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 NDUFAB1O14561 156 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 MGRN1O60291 552 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 ZNF250P15622 560 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 CDH15P55291 814 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 RAP1BP61224 184 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 PSME3P61289 254 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 RAP1AP62834 184 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 PSG4Q00888 419 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 SRSF2Q01130 221 aaKnown RBP15.12■□□□□ 0.01
NME3-205ENST00000563854 FGD3Q5JSP0 725 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 C8orf82Q6P1X6 216 aaPredicted RBP15.12■□□□□ 0.01
NME3-205ENST00000563854 HACD2Q6Y1H2 254 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 FAM46AQ96IP4 442 aaKnown RBP15.12■□□□□ 0.01
NME3-205ENST00000563854 LPAR2Q9HBW0 351 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 SLCO1C1Q9NYB5 712 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 ADA2Q9NZK5 511 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 ADAM18Q9Y3Q7 739 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 ENPP4Q9Y6X5 453 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 V9GYQ6 96 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 MXRA5Q9NR99 2828 aa15.12■□□□□ 0.01
NME3-205ENST00000563854 FBN3Q75N90 2809 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 IGLV3-9A0A075B6K5 115 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 C17orf100A8MU93 164 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 CDC42EP2O14613 210 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 PRSS23O95084 383 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 MT-ND5P03915 603 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 GCH1P30793 250 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 WNT5AP41221 380 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 TSTQ16762 297 aaKnown RBP15.11■□□□□ 0.01
NME3-205ENST00000563854 FAM27BQ5VT28 67 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 RINLQ6ZS11 566 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 ZNF101Q8IZC7 436 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 RNF113BQ8IZP6 322 aaKnown RBP15.11■□□□□ 0.01
NME3-205ENST00000563854 RNF148Q8N7C7 305 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 CLDND2Q8NHS1 167 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 FNDC8Q8TC99 324 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 CMTM5Q96DZ9 223 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 POM121L2Q96KW2 1035 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 ZNF570Q96NI8 536 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 OR2H1Q9GZK4 316 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 NDEL1Q9GZM8 345 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 WNT5BQ9H1J7 359 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 NMNAT1Q9HAN9 279 aaPredicted RBP15.11■□□□□ 0.01
NME3-205ENST00000563854 GRHPRQ9UBQ7 328 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 RPS6KA6Q9UK32 745 aa15.11■□□□□ 0.01
NME3-205ENST00000563854 FAM32AQ9Y421 112 aaKnown RBP15.11■□□□□ 0.01
NME3-205ENST00000563854 LOC100509620A0A075B734 347 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 XKRYO14609 159 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 WNT9BO14905 357 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 H1F0P07305 194 aaKnown RBP15.1■□□□□ 0.01
NME3-205ENST00000563854 CST2P09228 141 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 MSR1P21757 451 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 SRP14P37108 136 aaKnown RBP15.1■□□□□ 0.01
NME3-205ENST00000563854 MPV17P39210 176 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 FHL1Q13642 323 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ANKDD1AQ495B1 522 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ZBED5Q49AG3 693 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 AVPI1Q5T686 147 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ZNF774Q6NX45 483 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 RFPL4BQ6ZWI9 263 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ALDH16A1Q8IZ83 802 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ABHD4Q8TB40 342 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 SLC25A40Q8TBP6 338 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
NME3-205ENST00000563854 Q96M85 177 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 ZNF416Q9BWM5 594 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 NSRP1Q9H0G5 558 aaKnown RBP15.1■□□□□ 0.01
NME3-205ENST00000563854 RERGLQ9H628 205 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 EMC7Q9NPA0 242 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 SPAG4Q9NPE6 437 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 DECR2Q9NUI1 292 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 TREM2Q9NZC2 230 aa15.1■□□□□ 0.01
NME3-205ENST00000563854 TMEFF2Q9UIK5 374 aaPredicted RBP15.1■□□□□ 0.01
NME3-205ENST00000563854 TMEM5Q9Y2B1 443 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms