RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 B3GALT5Q9Y2C3 310 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 TPRKBQ9Y3C4 175 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 IER3IP1Q9Y5U9 82 aa4.11□□□□□ -1.75
CDR2-203ENST00000563573 USP24Q9UPU5 2620 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PIEZO2Q9H5I5 2752 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 IGKV1D-42A0A075B6H8 117 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 A0A0J9YW62 118 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 A0A1W2PPL8 197 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 MED19A0JLT2 244 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 MAGEA13PA6NCF6 341 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 A6NIZ1 184 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 LIPT2A6NK58 231 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ZNF726A6NNF4 738 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RIIAD1A6NNX1 92 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 B4DXG7 233 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 LRRN3E7EW58 273 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 NPIPA2E9PIF3 369 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 NPIPA5E9PKD4 350 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 NPIPA3F8WFD2 350 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 H7C1Q1 480 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TAF4O00268 1085 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PLPP3O14495 311 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TNFSF11O14788 317 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ARPC3O15145 178 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SURF4O15260 269 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TLX2O43763 284 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 AKR7A3O95154 331 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TNFAIP8O95379 198 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SYNGR4O95473 234 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 CLIC3O95833 236 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 BCL10O95999 233 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RENP00797 406 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 CD14P08571 375 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 IGFBP1P08833 259 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 RPSAP08865 295 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 TSPAN19P0C672 248 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 APEHP13798 732 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 CPN1P15169 458 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ZNF24P17028 368 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ZNF3P17036 446 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ZNF43P17038 809 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 IL11P20809 199 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ACVR2AP27037 513 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 UQCRC1P31930 480 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 AQP2P41181 271 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PCYT1AP49585 367 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 STARP49675 285 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 CLDN15P56746 228 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 B3GALT5-AS1P59052 145 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 CXCR4P61073 352 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RAP1BP61224 184 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RPL27P61353 136 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 ISL1P61371 349 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SNRPGP62308 76 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 RAP1AP62834 184 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ERVK-25P63136 954 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SRYQ05066 204 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RPL18Q07020 188 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 LGALS3BPQ08380 585 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 KLF9Q13886 244 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 C1DQ13901 141 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 MAD2L1BPQ15013 274 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 PGGHGQ32M88 737 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 MS4A18Q3C1V0 323 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 KLHL22Q53GT1 634 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 KRTCAP3Q53RY4 240 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 CLEC12AQ5QGZ9 265 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 C6orf141Q5SZD1 244 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SLX4IPQ5VYV7 408 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 C12orf73Q69YU5 71 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 GPR139Q6DWJ6 353 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ARHGAP11AQ6P4F7 1023 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PAQR6Q6TCH4 344 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ZNF620Q6ZNG0 422 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 Q6ZPB1 254 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 TRILQ7L0X0 811 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 SLC46A3Q7Z3Q1 461 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 HDDC2Q7Z4H3 204 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PXKQ7Z7A4 578 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 UEVLDQ8IX04 471 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 PM20D2Q8IYS1 436 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 UBQLNLQ8IYU4 475 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RBMXL3Q8N7X1 1067 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TCEANCQ8N8B7 351 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 EXD3Q8N9H8 876 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 ADPRHL1Q8NDY3 354 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 OR8J1Q8NGP2 316 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 OR13C2Q8NGS9 318 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 OR2V1Q8NHB1 315 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 RHOXF1Q8NHV9 184 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 NEIL3Q8TAT5 605 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 TMEM163Q8TC26 289 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 FNDC8Q8TC99 324 aa4.1□□□□□ -1.75
CDR2-203ENST00000563573 HDAC2Q92769 488 aaKnown RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 CPNE4Q96A23 557 aaPredicted RBP4.1□□□□□ -1.75
CDR2-203ENST00000563573 PNPLA2Q96AD5 504 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms