RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DDX39BQ13838 428 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CEACAM7Q14002 265 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FAM53BQ14153 422 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 MEF2DQ14814 521 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 UAP1Q16222 522 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FAM83EQ2M2I3 478 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 HKDC1Q2TB90 917 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 C18orf21Q32NC0 220 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ANKRD55Q3KP44 614 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NKAIN1Q4KMZ8 207 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 AGKQ53H12 422 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ATP1A1-AS1Q5TC04 95 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 C1orf189Q5VU69 101 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 TIFABQ6ZNK6 161 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FRA10AC1Q70Z53 315 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SLC22A16Q86VW1 577 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CATSPERDQ86XM0 798 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CDH26Q8IXH8 852 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 GCNT2Q8N0V5 402 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CSNK1A1LQ8N752 337 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 GBP7Q8N8V2 638 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 MFSD9Q8NBP5 474 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 OR56B2PQ8NGI1 322 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 OR4D10Q8NGI6 311 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 OR2Y1Q8NGV0 311 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 STAG3L4Q8TBR4 150 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NT5CQ8TCD5 201 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 KCTD4Q8WVF5 259 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 PHYHIPQ92561 330 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 RERGQ96A58 199 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 TSNARE1Q96NA8 513 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ZBTB18Q99592 522 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FUNDC2Q9BWH2 189 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CAPS2Q9BXY5 557 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SLC7A5P2Q9GIP4 190 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ADNPQ9H2P0 1102 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SPNS1Q9H2V7 528 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 EHD1Q9H4M9 534 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ALG9Q9H6U8 611 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NT5DC2Q9H857 520 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 STARD5Q9NSY2 213 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 PSMC3IPQ9P2W1 217 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FBXL4Q9UKA2 621 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 MRTO4Q9UKD2 239 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ARHGAP21Q5T5U3 1957 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 MYO18BQ8IUG5 2567 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 IGHV3OR16-10A0A075B7F0 116 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 TRBV4-1A0A0J9YWV2 114 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 IQANK1A0A1B0GTG1 560 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SERINC4A6NH21 518 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 NCF1BA6NI72 391 aaPredicted RBP3.97□□□□□ -1.77
LINC00254-201ENST00000563416 NCF1CA8MVU1 366 aaPredicted RBP3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SUPT3HB4E1H0 165 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 K7EQM0 130 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SLC1A7O00341 560 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 OR1F1O43749 312 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 KLHL41O60662 606 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SUPT3HO75486 399 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 STK16O75716 305 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SMIM10L1P0DMW3 83 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 C1GALT1C1LP0DN25 315 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 CLUP10909 449 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 GP9P14770 177 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 PAICSP22234 425 aaKnown RBP3.97□□□□□ -1.77
LINC00254-201ENST00000563416 AADACP22760 399 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 MMP11P24347 488 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 CXCR2P25025 360 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ACKR3P25106 362 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 OR1D4P47884 311 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 EFNA3P52797 238 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 EXOSC7Q15024 291 aaKnown RBP3.97□□□□□ -1.77
LINC00254-201ENST00000563416 PDK3Q15120 406 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ZMYND11Q15326 602 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 NDUFA9Q16795 377 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 DEFB109BQ30KR1 87 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ADPRMQ3LIE5 342 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 LGSNQ5TDP6 509 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 MLIPQ5VWP3 458 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 NCR3LG1Q68D85 454 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 EMBQ6PCB8 327 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 DHRS11Q6UWP2 260 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ZYG11AQ6WRX3 759 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 PRSS41Q7RTY9 318 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 RAB43Q86YS6 212 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 MREGQ8N565 214 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 TBC1D19Q8N5T2 526 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF740Q8NDX6 193 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 TTLQ8NG68 377 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ACMSDQ8TDX5 336 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 AENQ8WTP8 325 aaKnown RBP3.97□□□□□ -1.77
LINC00254-201ENST00000563416 TMEM45BQ96B21 275 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 BPIFA2Q96DR5 249 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 SMIM10Q96HG1 83 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 IP6K3Q96PC2 410 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF607Q96SK3 696 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 AIF1LQ9BQI0 150 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 EFCAB11Q9BUY7 163 aa3.97□□□□□ -1.77
LINC00254-201ENST00000563416 ALG12Q9BV10 488 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms