RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CD48P09326 243 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 MUC1P15941 1255 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 CD200P41217 278 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 RAB7AP51149 207 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 PAX9P55771 341 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ZNF121P58317 390 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 STXBP1P61764 594 aaKnown RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 MVKQ03426 396 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CDSNQ15517 529 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 MAPK14Q16539 360 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SYT14P1Q58G82 188 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 PRR5LQ6MZQ0 368 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CD200R1LQ6Q8B3 271 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SHC4Q6S5L8 630 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ATRAIDQ6UW56 229 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 DCDC5Q6ZRR9 648 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 TPRG1Q6ZUI0 275 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 GRINAQ7Z429 371 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 TSEN54Q7Z6J9 526 aaKnown RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 ISCA2Q86U28 154 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ANGPTL5Q86XS5 388 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 RAB43Q86YS6 212 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 LGI4Q8N135 537 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ARIH2OSQ8N7S6 290 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 OR8D1Q8WZ84 308 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 UFD1Q92890 307 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMG1-207ENST00000563235 CAPZA3Q96KX2 299 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SGK494Q96LW2 274 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 NOL4LQ96MY1 436 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 ZNF641Q96N77 438 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 MDFIQ99750 246 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ARV1Q9H2C2 271 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 POLD4Q9HCU8 107 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ACP6Q9NPH0 428 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SAR1AQ9NR31 198 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 GPATCH2LQ9NWQ4 482 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ZNF107Q9UII5 783 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 PILRAQ9UKJ1 303 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 TAF6LQ9Y6J9 622 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 C5P01031 1676 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 A0A1W2PRD5 423 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 A0A1W2PRF3 423 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 A0A1W2PRM7 423 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 FAM172BPA6NC97 362 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 DDTLA6NHG4 134 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 DHRS7CA6NNS2 312 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 G3V4G9 280 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SYT7O43581 403 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 FGF19O95750 216 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 F13BP05160 661 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 HIST1H2AGP0C0S8 130 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 H2AFB1P0C5Y9 115 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 T-ENOLP0DO92 83 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 GLI4P10075 376 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 HIST1H1EP10412 219 aaKnown RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 DPEP1P16444 411 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CA5AP35218 305 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 EFNA3P52797 238 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 IL10RBQ08334 325 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ZNF415Q09FC8 603 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 PNOCQ13519 176 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CYP51A1Q16850 503 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 ESCO2Q56NI9 601 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CGB2Q6NT52 195 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SSX7Q7RTT5 188 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 FAM220AQ7Z4H9 259 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CLNKQ7Z7G1 428 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 LINC01356Q8N9X3 169 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SSMEM1Q8WWF3 244 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 HIST1H2ACQ93077 130 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CNN2Q99439 309 aaKnown RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 P2RX4Q99571 388 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 RPP25Q9BUL9 199 aaKnown RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 SIGLEC8Q9NYZ4 499 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SLC17A4Q9Y2C5 497 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 PEX16Q9Y5Y5 336 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 BLOC1S5-TXNDC5H3BN57 136 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 SLC31A1O15431 190 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 PSTPIP1O43586 416 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 TIMP1P01033 207 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 IFNA4P05014 189 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 HAPLN1P10915 354 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 GP9P14770 177 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
SMG1-207ENST00000563235 OMGP23515 440 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 MARK3P27448 753 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 FMO3P31513 532 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 KIR2DL3P43628 341 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CDH12P55289 794 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 OR2B8PP59922 312 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 RAP1BP61224 184 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 GTF2BQ00403 316 aa4.22□□□□□ -1.73
SMG1-207ENST00000563235 CD300CQ08708 224 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms