RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 A0A1W2PPB8 328 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 A0A1W2PRS3 328 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 KIR3DP1A8MWS1 328 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 EEF1E1O43324 174 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 LYRM1O43325 122 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 FAM157BP0CG42 384 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF823P16415 610 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 MAPK3P27361 379 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 RIDAP52758 137 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF57Q68EA5 555 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 IZUMO1Q8IYV9 350 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ARMC10Q8N2F6 343 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF454Q8N9F8 522 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ENKURQ8TC29 256 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ITPKCQ96DU7 683 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 THAP7Q9BT49 309 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 FARSAQ9Y285 508 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 NCKAP5O14513 1909 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 A0A0B4J293 547 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 GPR171O14626 319 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 DOK2O60496 412 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 PCK2Q16822 640 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 RNASE12Q5GAN4 147 aaKnown RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 PYHIN1Q6K0P9 492 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 ASB18Q6ZVZ8 466 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 CHAC2Q8WUX2 184 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 LIN7BQ9HAP6 207 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 RBFOX1Q9NWB1 397 aaKnown RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 HDGFL3Q9Y3E1 203 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 H0YC42 278 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 ZIC3O60481 467 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 SRSF10O75494 262 aaKnown RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 MAS1P04201 325 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 INPP1P49441 399 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 CCR9P51686 369 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 CARD17Q5XLA6 110 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 CATSPERDQ86XM0 798 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 CMTM4Q8IZR5 234 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 OR1J4Q8NGS1 313 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 TSEN15Q8WW01 171 aaKnown RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 C11orf40Q8WZ69 217 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 RFT1Q96AA3 541 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 SLC25A38Q96DW6 304 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 ZPBPQ9BS86 351 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 DDA1Q9BW61 102 aa17.05■□□□□ 0.32
SMPD3-203ENST00000563226 MRPS7Q9Y2R9 242 aaKnown RBP17.05■□□□□ 0.32
SMPD3-203ENST00000563226 DOCK10Q96BY6 2186 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 A0A087WZY1 265 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 MEIOCA2RUB1 952 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 SULT2B1O00204 365 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF432O94892 652 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 PGA4P0DJD7 388 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 PGA3P0DJD8 388 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 PRKAR1AP10644 381 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 DNASE1L1P49184 302 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 UBE2NLQ5JXB2 153 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 CDCP2Q5VXM1 449 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 RAET1LQ5VY80 246 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 TMEM225Q6GV28 225 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 ASPHD2Q6ICH7 369 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 NOXO1Q8NFA2 376 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 MCHR2Q969V1 340 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 SLITRK2Q9H156 845 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
SMPD3-203ENST00000563226 OR2M5A3KFT3 312 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 AQP7P3A6NL99 342 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 DSCR4P56555 118 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 DGCR2P98153 550 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 CHAF1BQ13112 559 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 MFAP5Q13361 173 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 SSPNQ14714 243 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 TIGD3Q6B0B8 471 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 TMPPEQ6ZT21 453 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 FCRLAQ7L513 359 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 LIN37Q96GY3 246 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 ZC3HAV1LQ96H79 300 aaKnown RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 ZFP3Q96NJ6 502 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 RBP7Q96R05 134 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 RNF121Q9H920 327 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 NLKQ9UBE8 527 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 OR5V1Q9UGF6 321 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 DKKL1Q9UK85 242 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 LOC101059948A0A1B0GTJ6 334 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 EIF1AYO14602 144 aaKnown RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 AQP8O94778 261 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 UBL3O95164 117 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 HPP00738 406 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 CD63P08962 238 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 SRP9P49458 86 aaKnown RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 CLRN1P58418 232 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF239Q16600 458 aaKnown RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 MZT2BQ6NZ67 158 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 CNTRLQ7Z7A1 2325 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 DND1Q8IYX4 353 aaKnown RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 ADAMTS14Q8WXS8 1223 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms