RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C3AR1Q16581 482 aa4□□□□□ -1.77
SMG1-206ENST00000562668 NRF1Q16656 503 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CYP51A1Q16850 503 aa4□□□□□ -1.77
SMG1-206ENST00000562668 EIF2S3LQ2VIR3 472 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
SMG1-206ENST00000562668 LIN52Q52LA3 116 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ZNF311Q5JNZ3 666 aa4□□□□□ -1.77
SMG1-206ENST00000562668 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ARHGAP11AQ6P4F7 1023 aa4□□□□□ -1.77
SMG1-206ENST00000562668 EIF3MQ7L2H7 374 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 ARPINQ7Z6K5 226 aa4□□□□□ -1.77
SMG1-206ENST00000562668 NOXA1Q86UR1 476 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TMEM219Q86XT9 240 aa4□□□□□ -1.77
SMG1-206ENST00000562668 RBM45Q8IUH3 476 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 FOXRED2Q8IWF2 684 aa4□□□□□ -1.77
SMG1-206ENST00000562668 MICU2Q8IYU8 434 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PGAM4Q8N0Y7 254 aa4□□□□□ -1.77
SMG1-206ENST00000562668 C11orf65Q8NCR3 313 aa4□□□□□ -1.77
SMG1-206ENST00000562668 OR2T12Q8NG77 320 aa4□□□□□ -1.77
SMG1-206ENST00000562668 OR52E4Q8NGH9 312 aa4□□□□□ -1.77
SMG1-206ENST00000562668 OR5W2Q8NH69 310 aa4□□□□□ -1.77
SMG1-206ENST00000562668 FAM57AQ8TBR7 257 aa4□□□□□ -1.77
SMG1-206ENST00000562668 RND1Q92730 232 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SH3YL1Q96HL8 342 aaPredicted RBP4□□□□□ -1.77
SMG1-206ENST00000562668 NSL1Q96IY1 281 aa4□□□□□ -1.77
SMG1-206ENST00000562668 JSRP1Q96MG2 331 aaPredicted RBP4□□□□□ -1.77
SMG1-206ENST00000562668 COG8Q96MW5 612 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SH3GL1Q99961 368 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PINK1Q9BXM7 581 aa4□□□□□ -1.77
SMG1-206ENST00000562668 GFRA4Q9GZZ7 299 aa4□□□□□ -1.77
SMG1-206ENST00000562668 C1orf21Q9H246 121 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ESRP2Q9H6T0 727 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 SNTG1Q9NSN8 517 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PNPLA3Q9NST1 481 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ACER3Q9NUN7 267 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
SMG1-206ENST00000562668 KIAA1456Q9P272 454 aa4□□□□□ -1.77
SMG1-206ENST00000562668 B4GALT7Q9UBV7 327 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SLC35A3Q9Y2D2 325 aa4□□□□□ -1.77
SMG1-206ENST00000562668 AMDHD2Q9Y303 409 aa4□□□□□ -1.77
SMG1-206ENST00000562668 IFT52Q9Y366 437 aa4□□□□□ -1.77
SMG1-206ENST00000562668 GCN1Q92616 2671 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 ZGRF1Q86YA3 2104 aa4□□□□□ -1.77
SMG1-206ENST00000562668 POLEQ07864 2286 aa4□□□□□ -1.77
SMG1-206ENST00000562668 IGKV1D-42A0A075B6H8 117 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ELOVL7A1L3X0 281 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 EIF4E1BA6NMX2 242 aaKnown RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 NPIPA2E9PIF3 369 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 NPIPA3F8WFD2 350 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 J3QKU1 62 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 CXCR6O00574 342 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ADAMDEC1O15204 470 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 GMFGO60234 142 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 CDC40O60508 579 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMG1-206ENST00000562668 NPIPB7O75200 414 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 TRAPPC6AO75865 159 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 NCK1P16333 377 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 IL7RP16871 459 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 PGCP20142 388 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ATP6V1B2P21281 511 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ELK4P28324 431 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 HTR1EP28566 365 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 KDELR2P33947 212 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 HPCAP84074 193 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 HOXC5Q00444 222 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 MS4A2Q01362 244 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ART3Q13508 389 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 GNA13Q14344 377 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 QPRTQ15274 297 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 GUSBP1Q15486 140 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 BCL2A1Q16548 175 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ZSWIM7Q19AV6 140 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ERICH5Q6P6B1 374 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 WDR88Q6ZMY6 472 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 NCCRP1Q6ZVX7 275 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 PLEKHM3Q6ZWE6 761 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 GPAT4Q86UL3 456 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 IFNEQ86WN2 208 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ARMC8Q8IUR7 673 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 SLC30A8Q8IWU4 369 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 PEX5LQ8IYB4 626 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 DEFB107AQ8IZN7 70 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 RNF148Q8N7C7 305 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 FAM86B1Q8N7N1 296 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 LSMEM1Q8N8F7 131 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 SMYD1Q8NB12 490 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 SLC24A4Q8NFF2 622 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 OR4K17Q8NGC6 315 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 OR6T1Q8NGN1 323 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 OR14L1PQ8NHC6 308 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ZPLD1Q8TCW7 415 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ST8SIA1Q92185 356 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ABTB1Q969K4 478 aaPredicted RBP3.99□□□□□ -1.77
SMG1-206ENST00000562668 RNF145Q96MT1 663 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ZNF570Q96NI8 536 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 CDRT15Q96T59 188 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 ECSITQ9BQ95 431 aa3.99□□□□□ -1.77
SMG1-206ENST00000562668 PRSS27Q9BQR3 290 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms