RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 B3GLCTQ6Y288 498 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 BCDIN3DQ7Z5W3 292 aaKnown RBP8.52□□□□□ -1.05
CLK3-208ENST00000562626 ZBTB46Q86UZ6 589 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 C17orf78Q8N4C9 275 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 LILRB1Q8NHL6 650 aaPredicted RBP8.52□□□□□ -1.05
CLK3-208ENST00000562626 C11orf40Q8WZ69 217 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 HSD17B8Q92506 261 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 PTP4A1Q93096 173 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 UBE2FQ969M7 185 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 MS4A3Q96HJ5 214 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 SNX18Q96RF0 628 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 RBM4BQ9BQ04 359 aaKnown RBP8.52□□□□□ -1.05
CLK3-208ENST00000562626 ZNF416Q9BWM5 594 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 NDEL1Q9GZM8 345 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 LIME1Q9H400 295 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 RIBC2Q9H4K1 309 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 POLE4Q9NR33 117 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 CMC2Q9NRP2 79 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 AASSQ9UDR5 926 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 BAIAP2Q9UQB8 552 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 AMDHD2Q9Y303 409 aa8.52□□□□□ -1.05
CLK3-208ENST00000562626 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 TVP23AA6NH52 213 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 M0R1B8 84 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CASQ2O14958 399 aaPredicted RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 AHCYL1O43865 530 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 KHDRBS3O75525 346 aaKnown RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 WNT11O96014 354 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 RENP00797 406 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 IGLV1-44P01699 117 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CECR9P0C854 216 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CD79AP11912 226 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 ZNF32P17041 273 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 SPI1P17947 270 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 SLC2A5P22732 501 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CALCRP30988 508 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CAPZA2P47755 286 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 ZNF84P51523 738 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 IDH3GP51553 393 aaPredicted RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 ESRRGP62508 458 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 EFNB1P98172 346 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 TRIP10Q15642 601 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 FAM27BQ5VT28 67 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 PLBD1Q6P4A8 553 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 P2RY8Q86VZ1 359 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 C10orf67Q8IYJ2 551 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 GALNT4Q8N4A0 578 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 PAQR4Q8N4S7 273 aaPredicted RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 KBTBD8Q8NFY9 601 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 SLC26A10Q8NG04 563 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 DNAJC9Q8WXX5 260 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 C9orf16Q9BUW7 83 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 RACGAP1Q9H0H5 632 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 TOR3AQ9H497 397 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 RASSF1Q9NS23 344 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 ZNF226Q9NYT6 803 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 TVP23BQ9NYZ1 205 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CRNNQ9UBG3 495 aaPredicted RBP8.51□□□□□ -1.05
CLK3-208ENST00000562626 FKBP7Q9Y680 259 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 LHFPL6Q9Y693 200 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 SPG11Q96JI7 2443 aa8.51□□□□□ -1.05
CLK3-208ENST00000562626 CCDC182A6NF36 153 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 SHISA9B4DS77 424 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 IGKV3-15P01624 115 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 OR8G3PP0DMU2 310 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CCL2P13500 99 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CBR1P16152 277 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 ZNF14P17017 642 aaPredicted RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 ANOS1P23352 680 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CD40P25942 277 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 PEX19P40855 299 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 PTDSS1P48651 473 aaKnown RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 CENPAP49450 140 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 SLC25A1P53007 311 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 UBE2NP61088 152 aaKnown RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 RAB1AP62820 205 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 RAB39AQ14964 217 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 BEX5Q5H9J7 111 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 OGFRL1Q5TC84 451 aaPredicted RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 ADAM5Q6NVV9 412 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 ZBTB49Q6ZSB9 765 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CDC20BQ86Y33 519 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CPOQ8IVL8 374 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 LINC00346Q8IVM7 164 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 GLB1L2Q8IW92 636 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 TCEANCQ8N8B7 351 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 CPEB3Q8NE35 698 aaKnown RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 AKR7LQ8NHP1 331 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 SMAP2Q8WU79 429 aaPredicted RBP8.5□□□□□ -1.05
CLK3-208ENST00000562626 EME1Q96AY2 570 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 MUCL1Q96DR8 90 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 C14orf79Q96F83 325 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 IL4I1Q96RQ9 567 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 TMEM204Q9BSN7 226 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 GRIP2Q9C0E4 1043 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 WNT5BQ9H1J7 359 aa8.5□□□□□ -1.05
CLK3-208ENST00000562626 WDR76Q9H967 626 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms