RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 PWWP2BQ6NUJ5 590 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 DHRS11Q6UWP2 260 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 NDUFAF7Q7L592 441 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 TMED4Q7Z7H5 227 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 GPBAR1Q8TDU6 330 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 XAGE5Q8WWM1 108 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 DVL3Q92997 716 aaPredicted RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 C20orf24Q9BUV8 137 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 SELENOIQ9C0D9 397 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 SEMA4GQ9NTN9 838 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 COLEC10Q9Y6Z7 277 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 NUDT19A8MXV4 375 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 H7C1Q1 480 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 SEMA4FO95754 770 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR4E1P0C645 316 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 FAM157CP0CG43 387 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 NME2P22392 152 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 HIST1H1TP22492 207 aaPredicted RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 FAUP35544 74 aaKnown RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLK3-206ENST00000562078 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 OVCH1Q7RTY7 1134 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 GLB1L2Q8IW92 636 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR2T33Q8NG76 320 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR8S1Q8NH09 359 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ASB13Q8WXK3 278 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 PIK3IP1Q96FE7 263 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ZNF764Q96H86 408 aaPredicted RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 BMFQ96LC9 184 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 TAAR9Q96RI9 348 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR51V1Q9H2C8 321 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 GLIPR2Q9H4G4 154 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 UNKLQ9H9P5 680 aaKnown RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 NRIP3Q9NQ35 241 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 MED17Q9NVC6 651 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 OR5V1Q9UGF6 321 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 BLOC1S5-TXNDC5H3BN57 136 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 ARG1P05089 322 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 CLUP10909 449 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 EDN3P14138 238 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 CD80P33681 288 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 IFNGR2P38484 337 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 CAV2P51636 162 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 TAS2R43P59537 309 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 TRA2BP62995 288 aaKnown RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 SLC9A5Q14940 896 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 RSU1Q15404 277 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 OR8G1Q15617 311 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 LIPNQ5VXI9 398 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ABHD17CQ6PCB6 329 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ZNF620Q6ZNG0 422 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 CCDC116Q8IYX3 515 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ACOT4Q8N9L9 421 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 POM121Q96HA1 1249 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 AMDHD1Q96NU7 426 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 PDCD1LG2Q9BQ51 273 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NOX4Q9NPH5 578 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NTNG1Q9Y2I2 539 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 ATG4BQ9Y4P1 393 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 MCIDASD6RGH6 385 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 CDC42EP2O14613 210 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 RBBP9O75884 186 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NR2F1P10589 423 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 SRMP19623 302 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 HNRNPA2B1P22626 353 aaKnown RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 NTSP30990 170 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 GSK3AP49840 483 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NCBP2P52298 156 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLK3-206ENST00000562078 PKIAP61925 76 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 GUCA2AQ02747 115 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 AIMP2Q13155 320 aaKnown RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 GAS6Q14393 721 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 AWAT1Q58HT5 328 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NSUN5P2Q63ZY6 315 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 GID4Q8IVV7 300 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 NRMQ8IXM6 262 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 OR2L5Q8NG80 312 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 PIGXQ8TBF5 258 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 SLC35G5Q96KT7 338 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 TPSD1Q9BZJ3 242 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 UBQLN3Q9H347 655 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 PRDM7Q9NQW5 492 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 USP36Q9P275 1121 aaKnown RBP12.04□□□□□ -0.48
CLK3-206ENST00000562078 FBXL4Q9UKA2 621 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 TP53TG5Q9Y2B4 290 aa12.04□□□□□ -0.48
CLK3-206ENST00000562078 A0A0B4J2A0 478 aa12.03□□□□□ -0.48
CLK3-206ENST00000562078 A0A1B0GTI1 187 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms