RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ZNF664Q8N3J9 261 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 ARL14Q8N4G2 192 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 SIRT6Q8N6T7 355 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 CELF5Q8N6W0 485 aaKnown RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 ZNF614Q8N883 585 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 TTC16Q8NEE8 873 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 CCDC54Q8NEL0 328 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 SEMA6DQ8NFY4 1073 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 OR51S1Q8NGJ8 323 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 STT3BQ8TCJ2 826 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 NEK7Q8TDX7 302 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 DUSP19Q8WTR2 217 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 KCNE4Q8WWG9 221 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 CORO2AQ92828 525 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 UBE2E3Q969T4 207 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 TMEM19Q96HH6 336 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 SHDQ96IW2 340 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 AKR1E2Q96JD6 320 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 C5orf34Q96MH7 638 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 DEFB118Q96PH6 123 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 KLHL5Q96PQ7 755 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 GPA33Q99795 319 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 ARHGDIGQ99819 225 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 PRRT1Q99946 306 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 SNHG12Q9BXW3 62 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 PLA2G12AQ9BZM1 189 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 OR8D2Q9GZM6 311 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 ARV1Q9H2C2 271 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 RIMS4Q9H426 269 aaPredicted RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 PLEKHA2Q9HB19 425 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 KCNJ16Q9NPI9 418 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 MEPEQ9NQ76 525 aaPredicted RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 HINT3Q9NQE9 182 aaKnown RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 CMC2Q9NRP2 79 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 FAM212BQ9NTI7 297 aaPredicted RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 AHSPQ9NZD4 102 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 MYOTQ9UBF9 498 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 CACNG4Q9UBN1 327 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 OR5V1Q9UGF6 321 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 APOBEC3BQ9UH17 382 aaKnown RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 PRG3Q9Y2Y8 225 aaPredicted RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 ZNF337Q9Y3M9 751 aa6.59□□□□□ -1.35
CDH1-203ENST00000561751 NYNRINQ9P2P1 1898 aaKnown RBP6.59□□□□□ -1.35
CDH1-203ENST00000561751 SHROOM3Q8TF72 1996 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 SCN8AQ9UQD0 1980 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 hCG_1809904A0A1W2PP81 198 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 A0A1W2PR64 198 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 A0A1W2PRV1 198 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 OR2W5A6NFC9 320 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 A6NIZ1 184 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 FAM227AF5H4B4 570 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 CLDN5O00501 218 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 CYTIPO60759 359 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 GHRHP01286 108 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 PMP2P02689 132 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 PPBPP02775 128 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 SOD2P04179 222 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 QDPRP09417 244 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 PRSS56P0CW18 603 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 RD3LP0DJH9 198 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 GZMBP10144 247 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 CD37P11049 281 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 PGAM2P15259 253 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 ACRV1P26436 265 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 CHATP28329 748 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HOXA11P31270 313 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 OPRD1P41143 372 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 CDKN1CP49918 316 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 GATMP50440 423 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 ZNF84P51523 738 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 KLF3P57682 345 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 RPS23P62266 143 aaKnown RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 RPS11P62280 158 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 RBX1P62877 108 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 DHRS2Q13268 280 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 PIN1Q13526 163 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 KCNMB1Q16558 191 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 IQCJQ1A5X6 159 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 TMEM176BQ3YBM2 270 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 SCGB2B2Q4G0G5 96 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 ZNF385BQ569K4 471 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
CDH1-203ENST00000561751 C1orf194Q5T5A4 169 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 ARMC6Q6NXE6 501 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 OPN5Q6U736 354 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 ADAMTSL4Q6UY14 1074 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 FRRS1Q6ZNA5 592 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 C5orf24Q7Z6I8 188 aa6.58□□□□□ -1.36
CDH1-203ENST00000561751 SERPINA9Q86WD7 417 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms