RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 LIPNQ5VXI9 398 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 TMEM225Q6GV28 225 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 NIPAL3Q6P499 406 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 C5orf46Q6UWT4 87 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 NHLRC1Q6VVB1 395 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 ZNF621Q6ZSS3 439 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 AMIGO2Q86SJ2 522 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 LINC01356Q8N9X3 169 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 IL17RDQ8NFM7 739 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 OR6S1Q8NH40 331 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 MYDGFQ969H8 173 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 SLC41A3Q96GZ6 507 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 TMEM19Q96HH6 336 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 OXGR1Q96P68 337 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 SLC29A1Q99808 456 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 VRK1Q99986 396 aaPredicted RBP7.25□□□□□ -1.25
PALB2-202ENST00000561514 TMEM120AQ9BXJ8 343 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 RSPO3Q9BXY4 272 aaPredicted RBP7.25□□□□□ -1.25
PALB2-202ENST00000561514 TPT1P8Q9HAU6 139 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 NOX3Q9HBY0 568 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 GPR35Q9HC97 309 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 SDR39U1Q9NRG7 319 aaPredicted RBP7.25□□□□□ -1.25
PALB2-202ENST00000561514 PNPOQ9NVS9 261 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 ADPRHL2Q9NX46 363 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 ZIM2Q9NZV7 527 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 PCDHB14Q9Y5E9 798 aa7.25□□□□□ -1.25
PALB2-202ENST00000561514 A0A096LPE4 126 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 A0A1W2PPZ6 126 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 LRP5LA4QPB2 252 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ZNF99A8MXY4 864 aaPredicted RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 RFXANKO14593 260 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 AIM2O14862 343 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ANGPT2O15123 496 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 HDAC3O15379 428 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 OR2T1O43869 369 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 KRT33AO76009 404 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 APOC1P02654 83 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 BCHEP06276 602 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 CELA3BP08861 270 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 RPS2P15880 293 aaKnown RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 BGNP21810 368 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 NR4A1P22736 598 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 MRPL19P49406 292 aaKnown RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 GDI2P50395 445 aaKnown RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 DEFA1P59665 94 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 DEFA3P59666 94 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 MRPS11P82912 194 aaKnown RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 FADDQ13158 208 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 IQCCQ4KMZ1 466 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ARMC4Q5T2S8 1044 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 LPCAT4Q643R3 524 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 BRICD5Q6PL45 260 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 SERPINA11Q86U17 422 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 MDP1Q86V88 176 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ADGRG5Q8IZF4 528 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 CDK20Q8IZL9 346 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 PARP8Q8N3A8 854 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 CADM2Q8N3J6 435 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 SVOPLQ8N434 492 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 SEMA6DQ8NFY4 1073 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 DACT3Q96B18 629 aaPredicted RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 KTI12Q96EK9 354 aaPredicted RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 LRR1Q96L50 414 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 OR2M2Q96R28 347 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ZBTB18Q99592 522 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 CHID1Q9BWS9 393 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 PPA2Q9H2U2 334 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 EFCAB1Q9HAE3 211 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 ZNF556Q9HAH1 456 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 A4GALTQ9NPC4 353 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 AKIP1Q9NQ31 210 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 RPRD1BQ9NQG5 326 aaKnown RBP7.24□□□□□ -1.25
PALB2-202ENST00000561514 SEC14L4Q9UDX3 406 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 USP22Q9UPT9 525 aa7.24□□□□□ -1.25
PALB2-202ENST00000561514 A0A0G2JND7 137 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 A0A1W2PRG6 482 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 A0A1W2PRQ8 180 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 M0R082 166 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 TCF21O43680 179 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 AKAP8O43823 692 aaKnown RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 SLC22A3O75751 556 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CCNKO75909 580 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 APOA1P02647 267 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 ERCC1P07992 297 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF35P13682 527 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF14P17017 642 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF43P17038 809 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 ATF4P18848 351 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 NCF2P19878 526 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 PCMT1P22061 227 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 APEX1P27695 318 aaKnown RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 HTR2AP28223 471 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 EPHA3P29320 983 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 HOXA1P49639 335 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 COMPP49747 757 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 NME5P56597 212 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CLDN17P56750 224 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CD83Q01151 205 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 FLI1Q01543 452 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms