RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 MPZL1O95297 269 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 MAKP20794 623 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 DRD4P21917 467 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 ZNF81P51508 661 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 ERVK-25P63136 954 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 PSG4Q00888 419 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 CD47Q08722 323 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 SGCAQ16586 387 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 PCGF3Q3KNV8 242 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 SPRNQ5BIV9 151 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 THEM4Q5T1C6 240 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 METTL21CQ5VZV1 264 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 ACSM5Q6NUN0 579 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 SLC25A47Q6Q0C1 308 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 C12orf54Q6X4T0 127 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 IGFN1Q86VF2 1251 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 OR8J3Q8NGG0 315 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 IPCEF1Q8WWN9 437 aaPredicted RBP9.89□□□□□ -0.83
USP3-220ENST00000561381 LIPHQ8WWY8 451 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 MARS2Q96GW9 593 aaKnown RBP9.89□□□□□ -0.83
USP3-220ENST00000561381 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 TXNIPQ9H3M7 391 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 DECR2Q9NUI1 292 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 BAG5Q9UL15 447 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 MED31Q9Y3C7 131 aa9.89□□□□□ -0.83
USP3-220ENST00000561381 ZSCAN5BA6NJL1 495 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 MRASO14807 208 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 PNPP00491 289 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 IGF2P01344 180 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 IGHV2-5P01817 119 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 ADRA2CP18825 462 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 CFPP27918 469 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 YAP1P46937 504 aaKnown RBP9.88□□□□□ -0.83
USP3-220ENST00000561381 MMP15P51511 669 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 MMEL1Q495T6 779 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 LRRC23Q53EV4 343 aaPredicted RBP9.88□□□□□ -0.83
USP3-220ENST00000561381 CYBRD1Q53TN4 286 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 ALG10Q5BKT4 473 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 RFPL4BQ6ZWI9 263 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 HDDC2Q7Z4H3 204 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 MICU2Q8IYU8 434 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 LRRC75AQ8NAA5 344 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 SLC25A40Q8TBP6 338 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 TPD52L3Q96J77 140 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 SH3GL1Q99961 368 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 TMPRSS13Q9BYE2 586 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 OR2J1Q9GZK6 312 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 WNT5BQ9H1J7 359 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 KCNN2Q9H2S1 579 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 SMURF2Q9HAU4 748 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 A4GNTQ9UNA3 340 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 HIF3AQ9Y2N7 669 aa9.88□□□□□ -0.83
USP3-220ENST00000561381 DYSFO75923 2080 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 A0A0A6YYJ9 748 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 LOC100996750A0A140TA64 210 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 NPIPB13A6NJU9 1138 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 CLDN25C9JDP6 229 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 NPIPB4C9JG80 1138 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 NGFP01138 241 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 SCG5P05408 212 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 IFI30P13284 250 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 EPHA1P21709 976 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 LAP3P28838 519 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 KDELR2P33947 212 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 GDI2P50395 445 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 CTXN1P60606 82 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 RPL27P61353 136 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 TEKQ02763 1124 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 KLF10Q13118 480 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 FHL1Q13642 323 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 MOGQ16653 247 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 HFEQ30201 348 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 ZNF718Q3SXZ3 478 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 FAM27BQ5VT28 67 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 ZNF774Q6NX45 483 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 HDXQ7Z353 690 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 KLF14Q8TD94 323 aaPredicted RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 CCL17Q92583 94 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 BPIFA2Q96DR5 249 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 SIKE1Q9BRV8 207 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 KRTAP4-6Q9BYQ5 205 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 OR2H1Q9GZK4 316 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 POLR2J2Q9GZM3 115 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 POLR2J3Q9H1A7 115 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 DCAF16Q9NXF7 216 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 STX18Q9P2W9 335 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 RHCGQ9UBD6 479 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 EIF3KQ9UBQ5 218 aaKnown RBP9.87□□□□□ -0.83
USP3-220ENST00000561381 SNX13Q9Y5W8 968 aa9.87□□□□□ -0.83
USP3-220ENST00000561381 TRAV27A0A087WT01 109 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 A0A0G2JMP0 313 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 A0A0X1KG70 313 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 LOC100653049A0A140TA62 436 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 FAM220BPB1ANY3 271 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 H7C1C5 153 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms