RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SMIM10L1P0DMW3 83 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CTRB1P17538 263 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CELP19835 753 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 VDAC1P21796 283 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 MYL9P24844 172 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PSMB9P28065 219 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TEAD1P28347 426 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ADORA2BP29275 332 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 HMGCLP35914 325 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 DDOSTP39656 456 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CEACAM3P40198 252 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 GLP1RP43220 463 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RGRP47804 291 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RPL29P47914 159 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 PTH2RP49190 550 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TUFMP49411 452 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 CCR8P51685 355 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SUB1P53999 127 aaKnown RBP eCLIP1.71□□□□□ -2.14
RTF1-207ENST00000561076 RAB8AP61006 207 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 B2MP61769 119 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SELENOTP62341 195 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RPL31P62899 125 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 RPL32P62910 135 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 CYCSP99999 105 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 HMGCS1Q01581 520 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TGFBR3Q03167 851 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SRSF4Q08170 494 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 C2orf54Q08AI8 447 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SMARCB1Q12824 385 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RAB31Q13636 194 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TPBGQ13641 420 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SERTAD2Q14140 314 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 MAD2L1BPQ15013 274 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 TMEM249Q2WGJ8 235 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TIGITQ495A1 244 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 C14orf28Q4W4Y0 310 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 FFAR4Q5NUL3 377 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR2G6Q5TZ20 316 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 MORN5Q5VZ52 161 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PVRIGQ6DKI7 326 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CTRB2Q6GPI1 263 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 APOBEC3HQ6NTF7 200 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 FAM173BQ6P4H8 233 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZNF549Q6P9A3 640 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CNIH2Q6PI25 160 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CD300LGQ6UXG3 332 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 STAC2Q6ZMT1 411 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ACOT7LQ6ZUV0 252 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TRPT1Q86TN4 253 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 TMEM135Q86UB9 458 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 LHFPL3Q86UP9 236 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZNF677Q86XU0 584 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SLC13A5Q86YT5 568 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 TRAPPC5Q8IUR0 188 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 NAXDQ8IW45 347 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PUSL1Q8N0Z8 303 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 CYP4Z2PQ8N1L4 340 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ABHD12Q8N2K0 398 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 NUP37Q8NFH4 326 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR6Q1Q8NGQ2 317 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR9A4Q8NGU2 314 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR2T11Q8NH01 316 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR4Q3Q8NH05 313 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR56B4Q8NH76 319 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OLIG1Q8TAK6 271 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 FNDC8Q8TC99 324 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZFP90Q8TF47 636 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 DYDC1Q8WWB3 177 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 OR8D1Q8WZ84 308 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 IL22RA2Q969J5 263 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PSMG2Q969U7 264 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TMEM230Q96A57 120 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RPEQ96AT9 228 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PIK3IP1Q96FE7 263 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 DYNLL2Q96FJ2 89 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CMTM7Q96FZ5 175 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 WBP1Q96G27 269 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SMIM10Q96HG1 83 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 WFIKKN1Q96NZ8 548 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 IL17FQ96PD4 163 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZNF670Q9BS34 389 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TRIM51Q9BSJ1 452 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 FAIM2Q9BWQ8 316 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CLEC7AQ9BXN2 247 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 POTEKPQ9BYX7 375 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 BARHL1Q9BZE3 327 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 UBXN6Q9BZV1 441 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PORCNQ9H237 461 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CAB39LQ9H9S4 337 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 EBF2Q9HAK2 575 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RHOFQ9HBH0 211 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ABCB9Q9NP78 766 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SIX2Q9NPC8 291 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PRSS16Q9NQE7 514 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SLC2A9Q9NRM0 540 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.71□□□□□ -2.14
RTF1-207ENST00000561076 PLEKHJ1Q9NW61 149 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RMND1Q9NWS8 449 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TAS2R9Q9NYW1 312 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SHPKQ9UHJ6 478 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms