RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 WNT5AP41221 380 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 YAP1P46937 504 aaKnown RBP13.82□□□□□ -0.2
SNX1-213ENST00000561026 GDI2P50395 445 aaKnown RBP13.82□□□□□ -0.2
SNX1-213ENST00000561026 CTXN1P60606 82 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 ERVK-25P63136 954 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 TEKQ02763 1124 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 ZNF718Q3SXZ3 478 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 UNQ6126/PRO20091Q6UXV3 157 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 NRMQ8IXM6 262 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 OR51F2Q8NH61 342 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 GTF3AQ92664 365 aaKnown RBP13.82□□□□□ -0.2
SNX1-213ENST00000561026 RCN3Q96D15 328 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 MARS2Q96GW9 593 aaKnown RBP13.82□□□□□ -0.2
SNX1-213ENST00000561026 LRRC37BQ96QE4 947 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 FNDC11Q9BVV2 318 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 MAN2C1Q9NTJ4 1040 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 DECR2Q9NUI1 292 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 CMTM6Q9NX76 183 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 ARMCX1Q9P291 453 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 RHCGQ9UBD6 479 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 AP3M1Q9Y2T2 418 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 GRIP1Q9Y3R0 1128 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 TRAV27A0A087WT01 109 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 FFAR1O14842 300 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 LAP3P28838 519 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 GCH1P30793 250 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 GUCA1AP43080 201 aaPredicted RBP13.81□□□□□ -0.2
SNX1-213ENST00000561026 ZNF81P51508 661 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 MMP15P51511 669 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 GLO1Q04760 184 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 PRKCDQ05655 676 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 FHL1Q13642 323 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 ANKDD1AQ495B1 522 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 SPATA46Q5T0L3 261 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 FAM205BPQ63HN1 556 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 USP51Q70EK9 711 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 VTCN1Q7Z7D3 282 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 OAFQ86UD1 273 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 IGFN1Q86VF2 1251 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 SLC15A3Q8IY34 581 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 ALDH16A1Q8IZ83 802 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 OFCC1Q8IZS5 231 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 OR51A7Q8NH64 312 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 OR2H1Q9GZK4 316 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 WNT5BQ9H1J7 359 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 METTL17Q9H7H0 456 aaPredicted RBP13.81□□□□□ -0.2
SNX1-213ENST00000561026 GMPR2Q9P2T1 348 aaKnown RBP13.81□□□□□ -0.2
SNX1-213ENST00000561026 TIMM10BQ9Y5J6 103 aa13.81□□□□□ -0.2
SNX1-213ENST00000561026 TRAV20A0A0B4J274 112 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 A6NIZ1 184 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 J3KTA2 159 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 TPD52L2O43399 206 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 IFNW1P05000 195 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 CST2P09228 141 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 ANPEPP15144 967 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 ITGA2P17301 1181 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 MPV17P39210 176 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 RAP1BP61224 184 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 RAP1AP62834 184 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 MVKQ03426 396 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 TRAM2Q15035 370 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 TSTQ16762 297 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 TMEM255AQ5JRV8 349 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 FAM209AQ5JX71 171 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 AVPI1Q5T686 147 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 MBNL2Q5VZF2 373 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 FOXL2NBQ6ZUU3 175 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 MEX3DQ86XN8 651 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 C1orf174Q8IYL3 243 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 RNF113BQ8IZP6 322 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 POU5F2Q8N7G0 328 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 RP9Q8TA86 221 aaKnown RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 KLF14Q8TD94 323 aaPredicted RBP13.8□□□□□ -0.2
SNX1-213ENST00000561026 OCEL1Q9H607 264 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 ZNF665Q9H7R5 613 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 SAP30LQ9HAJ7 183 aa13.8□□□□□ -0.2
SNX1-213ENST00000561026 ANK2Q01484 3957 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 PLSCR5A0PG75 271 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 ICMTO60725 284 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 IGHV1-46P01743 117 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 PCBD1P61457 104 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 GUCY1A3Q02108 690 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 LIPEQ05469 1076 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 HFEQ30201 348 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 FAHD2BQ6P2I3 314 aaPredicted RBP13.79□□□□□ -0.2
SNX1-213ENST00000561026 SLC25A40Q8TBP6 338 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
SNX1-213ENST00000561026 GEMIN6Q8WXD5 167 aaKnown RBP13.79□□□□□ -0.2
SNX1-213ENST00000561026 ACOT11Q8WXI4 607 aaPredicted RBP13.79□□□□□ -0.2
SNX1-213ENST00000561026 FAHD2AQ96GK7 314 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 OR2J1Q9GZK6 312 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 WIPI2Q9Y4P8 454 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 CACNG2Q9Y698 323 aa13.79□□□□□ -0.2
SNX1-213ENST00000561026 A0A087WUU8 490 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
SNX1-213ENST00000561026 CXCR6O00574 342 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms