RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TEX47Q8TBZ9 253 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SLC7A13Q8TCU3 470 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ACOT11Q8WXI4 607 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 NANOS1Q8WY41 292 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 FBXO17Q96EF6 278 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SLC41A3Q96GZ6 507 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 BEX2Q9BXY8 128 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 CCDC90BQ9GZT6 254 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 CA10Q9NS85 328 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 RSL24D1Q9UHA3 163 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 TMEM5Q9Y2B1 443 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 COMMD3-BMI1R4GMX3 469 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 LOC390937A0A1W2PQ73 354 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 SNTNA6NMZ2 147 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ZAR1LA6NP61 321 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 RPL36A-HNRNPH2H7BZ11 118 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-214ENST00000560402 OR2T1O43869 369 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 LMX1BO60663 402 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 GASTP01350 101 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 IGKV3-15P01624 115 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 IGLV1-44P01699 117 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 PNMTP11086 282 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF43P17038 809 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 HNF1AP20823 631 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 POU1F1P28069 291 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 SERPINF1P36955 418 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 NR4A2P43354 598 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 NAAAQ02083 359 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 NEDD8Q15843 81 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 MST1LQ2TV78 715 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 C1orf94Q6P1W5 598 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 PTCHD4Q6ZW05 846 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF540Q8NDQ6 660 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 NUP37Q8NFH4 326 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF420Q8TAQ5 688 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-214ENST00000560402 CNIH3Q8TBE1 160 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 FCGR1BQ92637 280 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 BCL2L2Q92843 193 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF442Q9H7R0 627 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 PLCXD1Q9NUJ7 323 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 PTTG2Q9NZH5 202 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 RPS6KB2Q9UBS0 482 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 ANK2Q01484 3957 aa11.79□□□□□ -0.52
SMAD3-214ENST00000560402 EFCAB10A6NFE3 127 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 FTCDNL1E5RQL4 147 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 E9PQ18 207 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 SLC43A1O75387 559 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 ERCC1P07992 297 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-214ENST00000560402 CECR9P0C854 216 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 PRG2P13727 222 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 FMO3P31513 532 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 ROR2Q01974 943 aaKnown RBP11.78□□□□□ -0.52
SMAD3-214ENST00000560402 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 PTGES3Q15185 160 aaKnown RBP11.78□□□□□ -0.52
SMAD3-214ENST00000560402 NPTX1Q15818 432 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 CNPY1Q3B7I2 92 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 FAM69AQ5T7M9 428 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 SLX4IPQ5VYV7 408 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 RPL13AP3Q6NVV1 102 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 CCDC36Q8IYA8 594 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 RNF113BQ8IZP6 322 aaKnown RBP11.78□□□□□ -0.52
SMAD3-214ENST00000560402 CLIP4Q8N3C7 705 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 ADPRHL1Q8NDY3 354 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 FUZQ9BT04 418 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 PTDSS2Q9BVG9 487 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 NELFAQ9H3P2 528 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
SMAD3-214ENST00000560402 IRGMA1A4Y4 181 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 VSTM5A8MXK1 200 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 M0R3G1 203 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 TPST2O60704 377 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 UPK3AO75631 287 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF432O94892 652 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
SMAD3-214ENST00000560402 GSSP48637 474 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 CLDN17P56750 224 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 EGR4Q05215 589 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 TSPAN31Q12999 210 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 MFSD13AQ14CX5 517 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 SEC23BQ15437 767 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 ADIPOQQ15848 244 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 MEDAGQ5VYS4 303 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 MBOAT2Q6ZWT7 520 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 LINGO2Q7L985 606 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 PRSS48Q7RTY5 328 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-214ENST00000560402 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 LSMEM1Q8N8F7 131 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms