RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LRMDAQ9H2I8 198 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ARMC7Q9H6L4 198 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 TCF7L1Q9HCS4 588 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 MRPL39Q9NYK5 338 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ASH2LQ9UBL3 628 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 IL20RAQ9UHF4 553 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 KLHL21Q9UJP4 597 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 IGHV2-70DA0A0C4DH43 119 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 A0A0G2JND7 137 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 LRRN3E7EW58 273 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 DHHO43323 396 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 ENTPD5O75356 428 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 KRT75O95678 551 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 AHCYP23526 432 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 LIPAP38571 399 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 WNT5AP41221 380 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 PLP2Q04941 152 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC36A2Q495M3 483 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 ALG10BQ5I7T1 473 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 LRIF1Q5T3J3 769 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 MBNL2Q5VZF2 373 aaKnown RBP10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC16A14Q7RTX9 510 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 DPPA2Q7Z7J5 298 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM86BQ8N661 226 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 LSMEM1Q8N8F7 131 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 OR6X1Q8NH79 312 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC25A40Q8TBP6 338 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 KLF14Q8TD94 323 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 C10orf82Q8WW14 230 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 DNAJA4Q8WW22 397 aaPredicted RBP10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 ARHGDIGQ99819 225 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC30A2Q9BRI3 323 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 OR2J1Q9GZK6 312 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 MSL2Q9HCI7 577 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 CYSLTR2Q9NS75 346 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 CCDC167Q9P0B6 97 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 ZDHHC8Q9ULC8 765 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 LRCH1Q9Y2L9 728 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 IFT52Q9Y366 437 aa10.72□□□□□ -0.69
RABGGTA-213ENST00000560127 A0A0G2JPF8 293 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 CEACAM18A8MTB9 384 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 HNRNPCL2B2RXH8 293 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 HNRNPCL3B7ZW38 293 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 C11orf98E9PRG8 122 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 RFXANKO14593 260 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 HNRNPCL1O60812 293 aaKnown RBP10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 MELTFP08582 738 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 WNT2P09544 360 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 NUDT7P0C024 238 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 HNRNPCL4P0DMR1 293 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 CCNOP22674 350 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 APLNRP35414 380 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 CRATP43155 626 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 GYS2P54840 703 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 DSTNP60981 165 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 TNFAIP6P98066 277 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 C2orf68Q2NKX9 166 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 AGKQ53H12 422 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 SAMD5Q5TGI4 173 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 BTNL3Q6UXE8 466 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 DLEU7Q6UYE1 221 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF620Q6ZNG0 422 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 COMTD1Q86VU5 262 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 RAB40AQ8WXH6 277 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 SPDL1Q96EA4 605 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 SSBP3Q9BWW4 388 aaPredicted RBP10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 VAPAQ9P0L0 249 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
RABGGTA-213ENST00000560127 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 H0YL77 283 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 FBP2O00757 339 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 QDPRP09417 244 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 ADORA3P0DMS8 318 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 THRBP10828 461 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 STOMP27105 288 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 STX1BP61266 288 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 FAM189A2Q15884 450 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 RUSC1-AS1Q66K80 236 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 ULK3Q6PHR2 472 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 SLC35D2Q76EJ3 337 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 ZNF566Q969W8 418 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 ITCHQ96J02 903 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 POM121L2Q96KW2 1035 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 EPYCQ99645 322 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 SIKE1Q9BRV8 207 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 TPT1P8Q9HAU6 139 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 CACYBPQ9HB71 228 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms