RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MSI2Q96DH6 328 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 MAGEB18Q96M61 343 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 ANKRD27Q96NW4 1050 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 ZNF317Q96PQ6 595 aaPredicted RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 ARHGDIGQ99819 225 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 FOXB1Q99853 325 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 SOX7Q9BT81 388 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 TMEM120AQ9BXJ8 343 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 RNF121Q9H920 327 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MRPL39Q9NYK5 338 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 CRNNQ9UBG3 495 aaPredicted RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 SH3GLB1Q9Y371 365 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 CMAHPQ9Y471 501 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 YLPM1P49750 1951 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 ZANQ9Y493 2812 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TRAPPC13A5PLN9 417 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 HMGB1P1B2RPK0 211 aaPredicted RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 M0R233 179 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 EDF1O60869 148 aaKnown RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 PDE5AO76074 875 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 MT-ATP6P00846 226 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 CCL2P13500 99 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 HNF1AP20823 631 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 IL2RGP31785 369 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 LSP1P33241 339 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 PCGF2P35227 344 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 SEC24CP53992 1094 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 CLRN1P58418 232 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TAS2R41P59536 307 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 RAB1AP62820 205 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 GLO1Q04760 184 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TRIP10Q15642 601 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 EFNB3Q15768 340 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 LRRC23Q53EV4 343 aaPredicted RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 FAM120AOSQ5T036 256 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ZNF613Q6PF04 617 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ZNF771Q7L3S4 317 aaPredicted RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 PXKQ7Z7A4 578 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 PATL1Q86TB9 770 aaKnown RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 LRP11Q86VZ4 500 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 CARM1Q86X55 608 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 SNX32Q86XE0 403 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 SYT14Q8NB59 555 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ADPRHL1Q8NDY3 354 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 NUP37Q8NFH4 326 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 OR4K5Q8NGD3 323 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 PFN4Q8NHR9 129 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TMEM158Q8WZ71 300 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ZNF566Q969W8 418 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TAMM41Q96BW9 452 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 SLC41A3Q96GZ6 507 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 SH3GL3Q99963 347 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ECSITQ9BQ95 431 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 TMEM43Q9BTV4 400 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 MRPL37Q9BZE1 423 aaKnown RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 ZNF442Q9H7R0 627 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 CDH20Q9HBT6 801 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 LPAR2Q9HBW0 351 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 MOV10Q9HCE1 1003 aaKnown RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 NANSQ9NR45 359 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 ARGLU1Q9NWB6 273 aaPredicted RBP6.3□□□□□ -1.4
SPG11-213ENST00000558988 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
SPG11-213ENST00000558988 LOC102725191A0A1B0GVB3 256 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 TMEM129A0AVI4 362 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 VWC2LB2RUY7 222 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 NDUFS8O00217 210 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 FBP2O00757 339 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 MRASO14807 208 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 UBL3O95164 117 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 FARS2O95363 451 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 STAMBPO95630 424 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 BCL10O95999 233 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 THY1P04216 161 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 LCKP06239 509 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 QDPRP09417 244 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ZNF23P17027 643 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 CCNOP22674 350 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 NR4A1P22736 598 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 PAX7P23759 505 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 SRP14P37108 136 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 OR1E2P47887 323 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 CHN2P52757 468 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ERVS71-1P61550 626 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 GUCY1A3Q02108 690 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 RBBP4Q09028 425 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ZNF74Q16587 644 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 C21orf62-AS1Q17RA5 79 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 C3orf36Q3SXR2 165 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 C1QTNF12Q5T7M4 302 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 INTS11Q5TA45 600 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 RINLQ6ZS11 566 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 MEX3DQ86XN8 651 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 SKA3Q8IX90 412 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 CCDC36Q8IYA8 594 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 MICU2Q8IYU8 434 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 LRRC18Q8N456 261 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 DPP10Q8N608 796 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms