RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GPR4P46093 362 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 MMP15P51511 669 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 CTXN1P60606 82 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
VPS18-203ENST00000558855 SELENOWP63302 87 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 THEM4Q5T1C6 240 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 ZNF774Q6NX45 483 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 C8orf82Q6P1X6 216 aaPredicted RBP11.52□□□□□ -0.57
VPS18-203ENST00000558855 USP51Q70EK9 711 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 OFCC1Q8IZS5 231 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 SEMA6DQ8NFY4 1073 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 OR51A7Q8NH64 312 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 SLC25A40Q8TBP6 338 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 TMEM186Q96B77 213 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 ZNF416Q9BWM5 594 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 OR2J1Q9GZK6 312 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 POLR2J2Q9GZM3 115 aaKnown RBP11.52□□□□□ -0.57
VPS18-203ENST00000558855 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.57
VPS18-203ENST00000558855 METTL17Q9H7H0 456 aaPredicted RBP11.52□□□□□ -0.57
VPS18-203ENST00000558855 EMC7Q9NPA0 242 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 G6PC2Q9NQR9 355 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 CAPN7Q9Y6W3 813 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 NBEAL1Q6ZS30 2694 aa11.52□□□□□ -0.57
VPS18-203ENST00000558855 IQCMA0A1B0GVH7 501 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 C5orf49A4QMS7 147 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 B4DSR2 109 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 IGHV1-46P01743 117 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
VPS18-203ENST00000558855 NCK1P16333 377 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 LSP1P33241 339 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 APLNRP35414 380 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
VPS18-203ENST00000558855 SLC7A2P52569 658 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 MRPS11P82912 194 aaKnown RBP11.51□□□□□ -0.57
VPS18-203ENST00000558855 HSF2Q03933 536 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 LIPEQ05469 1076 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 MESTQ5EB52 335 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 FAM27BQ5VT28 67 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 GLCCI1Q86VQ1 547 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 LRRC37BQ96QE4 947 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 SH3GL1Q99961 368 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 ZNF665Q9H7R5 613 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 SMURF2Q9HAU4 748 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 CCNB1IP1Q9NPC3 277 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
VPS18-203ENST00000558855 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 LOC105371242A0A075B767 164 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 A0A1W2PPL8 197 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 SLC22A23A1A5C7 686 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 SPRY3O43610 288 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 NPPAP01160 153 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 TFP02787 698 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 COX4I1P13073 169 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 CRYBB2P43320 205 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 GSK3BP49841 420 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 ERFP50548 548 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 FXYD6P3P58550 94 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 PLP2Q04941 152 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 PRKCDQ05655 676 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 ST3GAL3Q11203 375 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 FAM122BQ7Z309 247 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 DPPA2Q7Z7J5 298 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 RFLNBQ8N5W9 214 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 FAM86B1Q8N7N1 296 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
VPS18-203ENST00000558855 GEMIN6Q8WXD5 167 aaKnown RBP11.5□□□□□ -0.57
VPS18-203ENST00000558855 C11orf40Q8WZ69 217 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 SLC7A6Q92536 515 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 Q96M85 177 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 ALG12Q9BV10 488 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 ARGLU1Q9NWB6 273 aaPredicted RBP11.5□□□□□ -0.57
VPS18-203ENST00000558855 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
VPS18-203ENST00000558855 CXCR6O00574 342 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 TCF21O43680 179 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 ZNF682O95780 498 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 IGHV2-5P01817 119 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 CST2P09228 141 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 RAD52P43351 418 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 SLC9A3P48764 834 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 ZNF81P51508 661 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 TMEM33P57088 247 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 TRAM2Q15035 370 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 MAPRE2Q15555 327 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 Q6ZR03 302 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 CBLL1Q75N03 491 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 OR1J2Q8NGS2 313 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 RASD2Q96D21 266 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 TMPRSS13Q9BYE2 586 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 CCDC134Q9H6E4 229 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 MSL2Q9HCI7 577 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 POLE4Q9NR33 117 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
VPS18-203ENST00000558855 EFCAB9A8MZ26 197 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms