RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 EMC7Q9NPA0 242 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
RPL28-207ENST00000558815 FBXO9Q9UK97 447 aaPredicted RBP13.17□□□□□ -0.3
RPL28-207ENST00000558815 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
RPL28-207ENST00000558815 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 SYNGR3O43761 229 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 MGRN1O60291 552 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 DAOP14920 347 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 MSR1P21757 451 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 STOMP27105 288 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 FANK1Q8TC84 345 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 NEU4Q8WWR8 484 aaPredicted RBP13.16□□□□□ -0.3
RPL28-207ENST00000558815 GPA33Q99795 319 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 TMCC3Q9ULS5 477 aa13.16□□□□□ -0.3
RPL28-207ENST00000558815 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.3
RPL28-207ENST00000558815 A0A096LNT2 108 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 IMPA2O14732 288 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 PTP4A3O75365 173 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 CLPTM1O96005 669 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
RPL28-207ENST00000558815 CST2P09228 141 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
RPL28-207ENST00000558815 CALB2P22676 271 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 SDHAP31040 664 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
RPL28-207ENST00000558815 FXYD6P3P58550 94 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 PSG4Q00888 419 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 GLO1Q04760 184 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
RPL28-207ENST00000558815 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 SPATS1Q496A3 300 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 FAM27BQ5VT28 67 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 UGT2A3Q6UWM9 527 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 FUZQ9BT04 418 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 NRIP3Q9NQ35 241 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 POLE4Q9NR33 117 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 ACTR3BQ9P1U1 418 aa13.15□□□□□ -0.3
RPL28-207ENST00000558815 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 CD5LO43866 347 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 SLC16A7O60669 478 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 SNAP29O95721 258 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 SCG5P05408 212 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 NAT2P11245 290 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 CTLA4P16410 223 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 RAD52P43351 418 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 NR4A2P43354 598 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 CENPAP49450 140 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 EVX1P49640 407 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 UCP2P55851 309 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 SELENOVP59797 346 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
RPL28-207ENST00000558815 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 GPR139Q6DWJ6 353 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.14□□□□□ -0.31
RPL28-207ENST00000558815 DHFR2Q86XF0 187 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
RPL28-207ENST00000558815 ERMAPQ96PL5 475 aaPredicted RBP13.14□□□□□ -0.31
RPL28-207ENST00000558815 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 WNT5BQ9H1J7 359 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 MYOZ1Q9NP98 299 aaPredicted RBP13.14□□□□□ -0.31
RPL28-207ENST00000558815 TAAR3PQ9P1P4 343 aa13.14□□□□□ -0.31
RPL28-207ENST00000558815 YLPM1P49750 1951 aaKnown RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 NDUFS8O00217 210 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 STAMBPO95630 424 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 SLC6A6P31641 620 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 IFNGR2P38484 337 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 KLF3P57682 345 aaPredicted RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 PCBD1P61457 104 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms