RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 URGCP-MRPS24S4R325 110 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 MSH6P52701 1360 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 COL22A1Q8NFW1 1626 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 IGHV1OR15-1A0A075B7D0 117 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TRAV9-2A0A087WT02 112 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 IGHV7-81A0A0B4J1V7 117 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 A0A0G2JRQ6 117 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 A0A1B0GTI1 187 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 SEC14L6B5MCN3 397 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 F8VP50 259 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 F8VZ95 297 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 SOCS3O14543 225 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 ITGB1BP1O14713 200 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TBL1XO60907 577 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 KBTBD11O94819 623 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 PGAM1P18669 254 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 RANBP1P43487 201 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 HILS1P60008 231 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CTAG1AP78358 180 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 UNC119Q13432 240 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 LY6DQ14210 128 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 PIGHQ14442 188 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 CLINT1Q14677 625 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 LRRC36Q1X8D7 754 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 QRICH1Q2TAL8 776 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 C2CD6Q53TS8 623 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 C1orf146Q5VVC0 180 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 LEMD1Q68G75 181 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CNIH2Q6PI25 160 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 WDR82Q6UXN9 313 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TMIGD1Q6UXZ0 262 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 ZNF600Q6ZNG1 722 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TPGS1Q6ZTW0 290 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 HORMAD1Q86X24 394 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 ABHD12Q8N2K0 398 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 HSD17B11Q8NBQ5 300 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 NECAP1Q8NC96 275 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CSNK1G2-AS1Q8NCQ2 148 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 OR2AP1Q8NGE2 309 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 OR51S1Q8NGJ8 323 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 OR6T1Q8NGN1 323 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TMEM54Q969K7 222 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 FAM122AQ96E09 287 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 ZFP3Q96NJ6 502 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 GPR21Q99679 349 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CIB1Q99828 191 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CTRCQ99895 268 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 RIOK2Q9BVS4 552 aaKnown RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 SRRQ9GZT4 340 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 DRC3Q9H069 523 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 C20orf85Q9H1P6 137 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 SAV1Q9H4B6 383 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 UBE2ZQ9H832 354 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 HEXA-AS1Q9H8Q6 139 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 SLC38A10Q9HBR0 1119 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 CLEC5AQ9NY25 188 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 VAPAQ9P0L0 249 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 ARMCX1Q9P291 453 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 BTNL2Q9UIR0 455 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 KLHL21Q9UJP4 597 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 TSSC4Q9Y5U2 329 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 LRRK1Q38SD2 2015 aa2.98□□□□□ -1.93
TDP1-217ENST00000557782 BRD4O60885 1362 aaPredicted RBP2.98□□□□□ -1.93
TDP1-217ENST00000557782 MROH7Q68CQ1 1323 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 FAM166BA8MTA8 275 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ERVV-1B6SEH8 477 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 C12orf77C9JDV5 145 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 K7N7A8 449 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 TNFSF11O14788 317 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 AGPAT2O15120 278 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 EMC8O43402 210 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SNAI2O43623 268 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ALOX12BO75342 701 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 AQP8O94778 261 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 NTN1O95631 604 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 TBX6O95947 436 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 GLAP06280 429 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SLC35E2P0CK97 266 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 PGAM2P15259 253 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 CSNK2A2P19784 350 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 RAB4AP20338 218 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 AK4P27144 223 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 AQP1P29972 269 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 IL2RGP31785 369 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SERPINB5P36952 375 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 VDAC2P45880 294 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 CSNK1DP48730 415 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 PRELPP51888 382 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 UBE2G2P60604 165 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 UBE2KP61086 200 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 IRX3P78415 501 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 MRPS15P82914 257 aaKnown RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 SLAMF1Q13291 335 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SLC39A6Q13433 755 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 OR4D1Q15615 310 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 OR7A5Q15622 319 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 KCTD19Q17RG1 926 aaPredicted RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 FAHD1Q6P587 224 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms