RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NUDCD3Q8IVD9 361 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 STK40Q8N2I9 435 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 C2orf73Q8N5S3 287 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC17Q8N6Y2 441 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CLDN22Q8N7P3 220 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CCDC197Q8NCU1 140 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR5H6Q8NGV6 325 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR4A16Q8NH70 328 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 THRSPQ92748 146 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 EMG1Q92979 244 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM45BQ96B21 275 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 BIRC7Q96CA5 298 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ATXN7L3BQ96GX2 97 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RILPQ96NA2 401 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SLC38A2Q96QD8 506 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CNN2Q99439 309 aaKnown RBP1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SORT1Q99523 831 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TPPP3Q9BW30 176 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PKIBQ9C010 78 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 NMUR2Q9GZQ4 415 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 IL22Q9GZX6 179 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ZBP1Q9H171 429 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CXXC4Q9H2H0 198 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM185BQ9H7F4 350 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ANKRA2Q9H9E1 313 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 POLD4Q9HCU8 107 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CTPS2Q9NRF8 586 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ABCD2Q9UBJ2 740 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 KLHL21Q9UJP4 597 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PSMD13Q9UNM6 376 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PLA2G4CQ9UP65 541 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RASD1Q9Y272 281 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ALG6Q9Y672 507 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PLXNC1O60486 1568 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 REREQ9P2R6 1566 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CACNA1SQ13698 1873 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 DENND4BO75064 1496 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ECM29Q5VYK3 1845 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CCT8L1PA6NM43 557 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PRAMEF26H0Y7S4 382 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CYB561D2O14569 222 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ARPC3O15145 178 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PPIHO43447 177 aaKnown RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 LATO43561 262 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CSO75390 466 aaKnown RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 KRT75O95678 551 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CALCAP01258 141 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 MMP1P03956 469 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 IFNA4P05014 189 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PCCAP05165 728 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CDK1P06493 297 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CHRNGP07510 517 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAL4GP0DN37 164 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SCGB1A1P11684 91 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 BCL3P20749 454 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 GSTM3P21266 225 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 WARSP23381 471 aaKnown RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 MARCKSP29966 332 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 COILP38432 576 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TPMTP51580 245 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CLDN18P56856 261 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 DNAJB13P59910 316 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 RAP1AP62834 184 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 REEP5Q00765 189 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TCP10Q12799 353 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 MADCAM1Q13477 382 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SERTAD2Q14140 314 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SIX1Q15475 284 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SSX2Q16385 188 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TRIM16LQ309B1 348 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CEACAM21Q3KPI0 293 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 DCAF4L1Q3SXM0 396 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM41BQ5BJD5 291 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 SPANXN2Q5MJ10 180 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 OTUD3Q5T2D3 398 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PRAMEF5Q5TYX0 476 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 PRAMEF6Q5VXH4 476 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 OR6B2Q6IFH4 312 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF530Q6P9A1 599 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 HAGHLQ6PII5 290 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 FAM151BQ6UXP7 276 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CERS6Q6ZMG9 384 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC28Q86X40 367 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 RBM45Q8IUH3 476 aaKnown RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 NAXDQ8IW45 347 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 RDH10Q8IZV5 341 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 C9orf62Q8N4C0 152 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 AQP11Q8NBQ7 271 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 OR5AU1Q8NGC0 362 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 OR8J3Q8NGG0 315 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 MARCH1Q8TCQ1 289 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 GIPC3Q8TF64 312 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 RASL10AQ92737 203 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 BORCS5Q969J3 196 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 EXOSC8Q96B26 276 aaKnown RBP1.34□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF597Q96LX8 424 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM246Q9BRR3 403 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 CABLES2Q9BTV7 478 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 DGCR6LQ9BY27 220 aa1.34□□□□□ -2.19
HIF1A-212ENST00000557538 UGT2B28Q9BY64 529 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms