RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 ZNF585AQ6P3V2 769 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 PLEKHG7Q6ZR37 379 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 SLC16A12Q6ZSM3 486 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 LINGO2Q7L985 606 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 FAM220AQ7Z4H9 259 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 EGFL6Q8IUX8 553 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 CPT1CQ8TCG5 803 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 THEM6Q8WUY1 208 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 WNT2BQ93097 391 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 APH1AQ96BI3 265 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 ALKBH3Q96Q83 286 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 AMELYQ99218 206 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 DOK1Q99704 481 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 SLX1AQ9BQ83 275 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 RBM24Q9BX46 236 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 EMC7Q9NPA0 242 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 GNG8Q9UK08 70 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 POLR1DQ9Y2S0 133 aa12.78□□□□□ -0.36
ARHGEF40-208ENST00000557498 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.36
ARHGEF40-208ENST00000557498 METTL15A6NJ78 407 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 TMCC2O75069 709 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 WDR1O75083 606 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 ABHD16AO95870 558 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 KRT8P05787 483 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 TPOP07202 933 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 GABRA1P14867 456 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 MSR1P21757 451 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 GADD45AP24522 165 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 EDNRAP25101 427 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 PTGER4P35408 488 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 GBX2P52951 348 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 MRPS34P82930 218 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 ROR2Q01974 943 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 KLRB1Q12918 225 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 STK11Q15831 433 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 NSUN5P2Q63ZY6 315 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 C19orf48Q6RUI8 117 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 ATCAYQ86WG3 371 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 PHC2Q8IXK0 858 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZFP41Q8N8Y5 198 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 OR52N5Q8NH56 324 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 NABP1Q96AH0 204 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 PELI1Q96FA3 418 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 ABHD6Q9BV23 337 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 CDADC1Q9BWV3 514 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLC25A18Q9H1K4 315 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 CRLF2Q9HC73 371 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 NDUFB11Q9NX14 153 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 CYB5R1Q9UHQ9 305 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 MRM2Q9UI43 246 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 IKZF2Q9UKS7 526 aa12.77□□□□□ -0.37
ARHGEF40-208ENST00000557498 FIGNL2A6NMB9 653 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 E9PI62 339 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 PSMD9O00233 223 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 SULT1C4O75897 302 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 KRT33AO76009 404 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 NPR2P20594 1047 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 ROM1Q03395 351 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 GUSBP1Q15486 140 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 HSPB2Q16082 182 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 SGCAQ16586 387 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 C1orf185Q5T7R7 199 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 OR2A2Q6IF42 318 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 KCTD18Q6PI47 426 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 RPTNQ6XPR3 784 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 DCXRQ7Z4W1 244 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 CD163Q86VB7 1156 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF100Q8IYN0 542 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 ST7LQ8TDW4 575 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 HTRA1Q92743 480 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 TMEM38BQ9NVV0 291 aa12.76□□□□□ -0.37
ARHGEF40-208ENST00000557498 SLCO1C1Q9NYB5 712 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms