RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TMEM120BA0PK00 339 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 EVPLLA8MZ36 301 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 H3BSA7 217 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 TPST2O60704 377 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ERLIN1O75477 346 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 CLPTM1O96005 669 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 FSHBP01225 129 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 IGF2P01344 180 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 IGHG1P01857 330 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 HIST1H2ABP04908 130 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ADH4P08319 380 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 PGA4P0DJD7 388 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 PGA3P0DJD8 388 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ZNF133P52736 654 aaPredicted RBP7.36□□□□□ -1.23
VRK1-206ENST00000557222 CCL8P80075 99 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 FOXL1Q12952 345 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ZNF74Q16587 644 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 HFEQ30201 348 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 AWAT1Q58HT5 328 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 PRR31Q5SQ13 230 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 DCAF12L2Q5VW00 463 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 HIST3H2AQ7L7L0 130 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 SLC16A14Q7RTX9 510 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 MAVSQ7Z434 540 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 WDFY1Q8IWB7 410 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 SLC30A8Q8IWU4 369 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 MSRB3Q8IXL7 192 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 BPIFB2Q8N4F0 458 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ANKRD42Q8N9B4 389 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 FGFBP3Q8TAT2 258 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 HIST1H2ACQ93077 130 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 SEPHS2Q99611 448 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 ARHGDIGQ99819 225 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 RNF121Q9H920 327 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 NANSQ9NR45 359 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 CYSLTR2Q9NS75 346 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 STX18Q9P2W9 335 aaKnown RBP7.36□□□□□ -1.23
VRK1-206ENST00000557222 CGGBP1Q9UFW8 167 aaPredicted RBP7.36□□□□□ -1.23
VRK1-206ENST00000557222 ANGPT4Q9Y264 503 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 WIPI2Q9Y4P8 454 aa7.36□□□□□ -1.23
VRK1-206ENST00000557222 LRRN3E7EW58 273 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 RNF13O43567 381 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 CDC14BO60729 498 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 LCKP06239 509 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 MMP7P09237 267 aaPredicted RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 QDPRP09417 244 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 PATE4P0C8F1 98 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 HKR1P10072 659 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 NR2C1P13056 603 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 DRD4P21917 467 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 CPT2P23786 658 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 APLNRP35414 380 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 ZNF84P51523 738 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 MVKQ03426 396 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 ZNF718Q3SXZ3 478 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 C10orf128Q5T292 105 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 TTC33Q6PID6 262 aaPredicted RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 USP51Q70EK9 711 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 FUNDC1Q8IVP5 155 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 ZDHHC22Q8N966 263 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SYT14Q8NB59 555 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 C11orf65Q8NCR3 313 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 RBM15BQ8NDT2 890 aaKnown RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 OR4K5Q8NGD3 323 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 POP5Q969H6 163 aaKnown RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 MCHR2Q969V1 340 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SPDL1Q96EA4 605 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 DHRS1Q96LJ7 313 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 MCHR1Q99705 422 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 GPA33Q99795 319 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SH3GL3Q99963 347 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 CCDC28BQ9BUN5 200 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 ZNF426Q9BUY5 554 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 MRPL13Q9BYD1 178 aaKnown RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 PARD6BQ9BYG5 372 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 EGLN1Q9GZT9 426 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 PCDHAC1Q9H158 963 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 KCNN2Q9H2S1 579 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SAP30LQ9HAJ7 183 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SIAEQ9HAT2 523 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 SMURF2Q9HAU4 748 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 DDX28Q9NUL7 540 aaKnown RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 NKIRAS1Q9NYS0 192 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 VAPAQ9P0L0 249 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 EIF3KQ9UBQ5 218 aaKnown RBP7.35□□□□□ -1.23
VRK1-206ENST00000557222 RAB21Q9UL25 225 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 ZDHHC8Q9ULC8 765 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 USH1CQ9Y6N9 552 aa7.35□□□□□ -1.23
VRK1-206ENST00000557222 A0A1W2PRG6 482 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 PLSCR5A0PG75 271 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 TRAPPC13A5PLN9 417 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 GMNCA6NCL1 334 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 NPIPB13A6NJU9 1138 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 NPIPB4C9JG80 1138 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 C11orf98E9PRG8 122 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 POLR3GO15318 223 aaPredicted RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 TPD52L2O43399 206 aaKnown RBP7.34□□□□□ -1.23
VRK1-206ENST00000557222 FOXH1O75593 365 aa7.34□□□□□ -1.23
VRK1-206ENST00000557222 SERPINI2O75830 405 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms