RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CCT3P49368 545 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 POLR2HP52434 150 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 UCP2P55851 309 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 KCNJ10P78508 379 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 PDE7AQ13946 482 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 KIAA0040Q15053 153 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 TSTQ16762 297 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 GSTA3Q16772 222 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 CEACAM16Q2WEN9 425 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 GPR157Q5UAW9 335 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 EMBQ6PCB8 327 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 BRD3OSQ6XYD6 125 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 GPRIN3Q6ZVF9 776 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 SZRD1Q7Z422 152 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 RNF130Q86XS8 419 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 GPR137CQ8N3F9 429 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 LRTOMTQ8WZ04 291 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 PPCDCQ96CD2 204 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 THOC1Q96FV9 657 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 CHMP6Q96FZ7 201 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 LRR1Q96L50 414 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 TSPAN32Q96QS1 320 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 MRPL57Q9BQC6 102 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 BCL2L14Q9BZR8 327 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 REEP4Q9H6H4 257 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 NANOGQ9H9S0 305 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 CYSLTR2Q9NS75 346 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 SERTAD4Q9NUC0 356 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 ZCCHC3Q9NUD5 404 aaKnown RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 SH3BP4Q9P0V3 963 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 ZDHHC8Q9ULC8 765 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 LRCH1Q9Y2L9 728 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 PCDHGB5Q9Y5G0 923 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 USH1CQ9Y6N9 552 aa3.89□□□□□ -1.79
SCFD1-223ENST00000557076 NUP214P35658 2090 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-223ENST00000557076 DNAH7Q8WXX0 4024 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 WI2-2373I1.2A0A1W2PRP0 233 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 FAAHO00519 579 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TM9SF1O15321 606 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 SCN2BO60939 215 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TGDSO95455 350 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 FSTL3O95633 263 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 RAB36O95755 333 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CHRM4P08173 479 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CD55P08174 381 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 OR8G3PP0DMU2 310 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 UROSP10746 265 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF43P17038 809 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TACR3P29371 465 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 HMOX2P30519 316 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MMP15P51511 669 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 PKNOX1P55347 436 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CLDN17P56750 224 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 SEC61A1P61619 476 aaKnown RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 BTG1P62324 171 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 NAB1Q13506 487 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 DCTN2Q13561 401 aaKnown RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CNN3Q15417 329 aaKnown RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 OR7A5Q15622 319 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 GPR68Q15743 365 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MAPK14Q16539 360 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 UNC50Q53HI1 259 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 RNF220Q5VTB9 566 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 DHRS7BQ6IAN0 325 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 SLC35E4Q6ICL7 350 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 SLC18B1Q6NT16 456 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF774Q6NX45 483 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 PGBD2Q6P3X8 592 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF771Q7L3S4 317 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 PIWIL3Q7Z3Z3 882 aaKnown RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 LRRC8AQ8IWT6 810 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ARFGAP2Q8N6H7 521 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF283Q8N7M2 679 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 OR4F17Q8NGA8 305 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CDC26Q8NHZ8 85 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 KIF18AQ8NI77 898 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MUC7Q8TAX7 377 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MTERF3Q96E29 417 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 PLEKHA8Q96JA3 519 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 SAMD8Q96LT4 415 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 OXGR1Q96P68 337 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 OR4F4Q96R69 305 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ARPC5LQ9BPX5 153 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MECRQ9BV79 373 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TAPBPLQ9BX59 468 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TRIM15Q9C019 465 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CENPHQ9H3R5 247 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 A4GALTQ9NPC4 353 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TMEM106BQ9NUM4 274 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ACOXLQ9NUZ1 547 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF224Q9NZL3 707 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 RPUSD1Q9UJJ7 312 aaKnown RBP3.88□□□□□ -1.79
SCFD1-223ENST00000557076 MKLN1Q9UL63 735 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 STK38LQ9Y2H1 464 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 TIMM22Q9Y584 194 aa3.88□□□□□ -1.79
SCFD1-223ENST00000557076 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms