RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 F13BP05160 661 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 CD55P08174 381 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ZNF32P17041 273 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 CDAP32320 146 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 GDI2P50395 445 aaKnown RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 PPP1CBP62140 327 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 BTG1P62324 171 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 VSNL1P62760 191 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 GABPB1Q06547 395 aaPredicted RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 PAX8Q06710 450 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 SCARB2Q14108 478 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ZMYND11Q15326 602 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ZMAT1Q5H9K5 638 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ZNF613Q6PF04 617 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 UNQ6126/PRO20091Q6UXV3 157 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 LINC00114Q6XXX2 140 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 C9orf139Q6ZV77 190 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 MAVSQ7Z434 540 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 LRRC28Q86X40 367 aaPredicted RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ARMC8Q8IUR7 673 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 KIR3DL3Q8N743 410 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 SMYD1Q8NB12 490 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 NOXO1Q8NFA2 376 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 AKR7LQ8NHP1 331 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ZBTB9Q96C00 473 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 MAELQ96JY0 434 aaKnown RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 OR52B2Q96RD2 323 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 DIRC2Q96SL1 478 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 MCHR1Q99705 422 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 TMEM109Q9BVC6 243 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 MRPL13Q9BYD1 178 aaKnown RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 SLC19A3Q9BZV2 496 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 KCNN2Q9H2S1 579 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 IKZF5Q9H5V7 419 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 SIAEQ9HAT2 523 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 KCNK9Q9NPC2 374 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 SLCO1B3Q9NPD5 702 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 THAP1Q9NVV9 213 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 CGGBP1Q9UFW8 167 aaPredicted RBP7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 KLHL21Q9UJP4 597 aa7.59□□□□□ -1.19
HNRNPC-227ENST00000556897 TRAV40A0A0B4J280 105 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 A0A1B0GUS0 222 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 CPSF4LA6NMK7 179 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 MCIDASD6RGH6 385 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 F5H0A9 414 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 BLOC1S5-TXNDC5H3BN57 136 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 MGRN1O60291 552 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 FMO6PO60774 539 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SNNO75324 88 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 TGDSO95455 350 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SLC2A10O95528 541 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 PLATP00750 562 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 THY1P04216 161 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 HIST1H2ABP04908 130 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ASAH2BP0C7U1 165 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 UMPSP11172 480 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SLC6A2P23975 617 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ERVK-25P63136 954 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 MRPS34P82930 218 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 PSG4Q00888 419 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 NPTX1Q15818 432 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SGCAQ16586 387 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ESCO2Q56NI9 601 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 MTX3Q5HYI7 312 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ENTPD8Q5MY95 495 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 TTC33Q6PID6 262 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 HIST3H2AQ7L7L0 130 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 NANOGNBQ7Z5D8 188 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ZNF283Q8N7M2 679 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ANKRD42Q8N9B4 389 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 OR2Z1Q8NG97 314 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 OR6T1Q8NGN1 323 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ADAMTS16Q8TE57 1224 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 AENQ8WTP8 325 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 NSMAFQ92636 917 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 HIST1H2ACQ93077 130 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 UPRTQ96BW1 309 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SIGLEC11Q96RL6 698 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ZNF607Q96SK3 696 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 SEPHS2Q99611 448 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 MMP27Q9H306 513 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 CENPHQ9H3R5 247 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 NANOGQ9H9S0 305 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 BEX1Q9HBH7 125 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 TNFRSF19Q9NS68 423 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 VAPAQ9P0L0 249 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 ZNF229Q9UJW7 825 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 UGT2A1Q9Y4X1 527 aa7.58□□□□□ -1.2
HNRNPC-227ENST00000556897 DOCK11Q5JSL3 2073 aa7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 IGKV1D-43A0A0B4J1Z2 117 aa7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 A0A1W2PRG6 482 aa7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 M0QZ24 198 aa7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 TIMM8AO60220 97 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 TRMUO75648 421 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-227ENST00000556897 LYPD3O95274 346 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms