RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 CCNOP22674 350 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 CFPP27918 469 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 ARFIP2P53365 341 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 MVKQ03426 396 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 ST3GAL3Q11203 375 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 DCAF12L2Q5VW00 463 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 NANOGP8Q6NSW7 305 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 C1QL2Q7Z5L3 287 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 SYT9Q86SS6 491 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 PAQR4Q8N4S7 273 aaPredicted RBP14.61□□□□□ -0.07
CHGA-206ENST00000556876 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 NTN4Q9HB63 628 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 AP3M1Q9Y2T2 418 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 WIPI2Q9Y4P8 454 aa14.61□□□□□ -0.07
CHGA-206ENST00000556876 TMEM89A2RUT3 159 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 BBIP1A8MTZ0 92 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 WNT9BO14905 357 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 PLPP2O43688 288 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 IGHV2-5P01817 119 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 CST2P09228 141 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 AQP2P41181 271 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 CD47Q08722 323 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 SELPLGQ14242 412 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 MAPRE2Q15555 327 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 SGCAQ16586 387 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 ALG10Q5BKT4 473 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 ST7LQ8TDW4 575 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 LZICQ8WZA0 190 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 CCL17Q92583 94 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 POM121L2Q96KW2 1035 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 COG8Q96MW5 612 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 OR51B6Q9H340 312 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 HIF3AQ9Y2N7 669 aa14.6□□□□□ -0.07
CHGA-206ENST00000556876 C5orf49A4QMS7 147 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 A6NIZ1 184 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 C12orf71A8MTZ7 269 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 FOXH1O75593 365 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 ZNF32P17041 273 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 TNFSF4P23510 183 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 CPT2P23786 658 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 GZMMP51124 257 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 RAP1BP61224 184 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 RAP1AP62834 184 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 TSTQ16762 297 aaKnown RBP14.59□□□□□ -0.07
CHGA-206ENST00000556876 BPIFB2Q8N4F0 458 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 PCYOX1LQ8NBM8 494 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 KLF14Q8TD94 323 aaPredicted RBP14.59□□□□□ -0.07
CHGA-206ENST00000556876 LRRC58Q96CX6 371 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 MARS2Q96GW9 593 aaKnown RBP14.59□□□□□ -0.07
CHGA-206ENST00000556876 GAL3ST1Q99999 423 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 NDEL1Q9GZM8 345 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 GID8Q9NWU2 228 aa14.59□□□□□ -0.07
CHGA-206ENST00000556876 NDRG4Q9ULP0 352 aaKnown RBP14.59□□□□□ -0.07
CHGA-206ENST00000556876 AHCYL1O43865 530 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 DEAF1O75398 565 aaPredicted RBP14.58□□□□□ -0.08
CHGA-206ENST00000556876 CD55P08174 381 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 COX5BP10606 129 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 MMP15P51511 669 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 RPL27P61353 136 aaKnown RBP14.58□□□□□ -0.08
CHGA-206ENST00000556876 PSG4Q00888 419 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 PIN1Q13526 163 aaPredicted RBP14.58□□□□□ -0.08
CHGA-206ENST00000556876 AVPI1Q5T686 147 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 RBMS3Q6XE24 437 aaKnown RBP14.58□□□□□ -0.08
CHGA-206ENST00000556876 CALHM3Q86XJ0 350 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 NKAIN4Q8IVV8 208 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 PFN4Q8NHR9 129 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 TMEM255BQ8WV15 326 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 NMD3Q96D46 503 aaKnown RBP14.58□□□□□ -0.08
CHGA-206ENST00000556876 TSPAN32Q96QS1 320 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 C7orf69Q9H7B7 122 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 NPHS2Q9NP85 383 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 UGT2A1Q9Y4X1 527 aa14.58□□□□□ -0.08
CHGA-206ENST00000556876 A0A0G2JND7 137 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 SURF4O15260 269 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 SPRY3O43610 288 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 EDF1O60869 148 aaKnown RBP14.57□□□□□ -0.08
CHGA-206ENST00000556876 IGHV1-46P01743 117 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 IGHMP01871 453 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 TNFRSF1AP19438 455 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 GSTM3P21266 225 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 SLC9A3P48764 834 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 ERVS71-1P61550 626 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 LAPTM4AQ15012 233 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 SLC25A47Q6Q0C1 308 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 TSPYL5Q86VY4 417 aaPredicted RBP14.57□□□□□ -0.08
CHGA-206ENST00000556876 RNF113BQ8IZP6 322 aaKnown RBP14.57□□□□□ -0.08
CHGA-206ENST00000556876 SPICQ8N5J4 248 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 NPEPL1Q8NDH3 523 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 SLC25A40Q8TBP6 338 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 NSMAFQ92636 917 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 HDAC2Q92769 488 aaKnown RBP14.57□□□□□ -0.08
CHGA-206ENST00000556876 NABP1Q96AH0 204 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 BPIFA2Q96DR5 249 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 C4orf45Q96LM5 186 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 TMPRSS13Q9BYE2 586 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 OR2H1Q9GZK4 316 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 MAN2C1Q9NTJ4 1040 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 DDX28Q9NUL7 540 aaKnown RBP14.57□□□□□ -0.08
CHGA-206ENST00000556876 TBCCD1Q9NVR7 557 aa14.57□□□□□ -0.08
CHGA-206ENST00000556876 LOC105371242A0A075B767 164 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms